Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC4.65□□□□□ -1.66
VGLL1Q99990 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.65□□□□□ -1.66
VGLL1Q99990 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
VGLL1Q99990 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
VGLL1Q99990 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 FANCD2P2-201ENST00000437591 1400 ntBASIC4.65□□□□□ -1.66
VGLL1Q99990 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.65□□□□□ -1.66
VGLL1Q99990 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC4.65□□□□□ -1.66
VGLL1Q99990 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC4.65□□□□□ -1.66
VGLL1Q99990 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
VGLL1Q99990 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.65□□□□□ -1.66
VGLL1Q99990 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 RNU6-670P-201ENST00000364312 104 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 SNORA43.1-201ENST00000364863 140 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VGLL1Q99990 RNU6-883P-201ENST00000384597 107 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 RNU6-564P-201ENST00000410983 104 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AL365220.1-201ENST00000432923 399 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 NPM1P48-201ENST00000436002 853 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 RPL36AP55-201ENST00000454114 305 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CYP4F27P-201ENST00000514557 494 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 RNA5SP418-201ENST00000515951 117 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AP003049.1-201ENST00000529418 457 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 OR6M2P-201ENST00000529831 871 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CHEK2P2-201ENST00000554701 672 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 AC011270.1-201ENST00000558606 583 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC019322.1-201ENST00000571869 389 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.65□□□□□ -1.67
VGLL1Q99990 AC020915.5-201ENST00000596836 964 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 AL591222.2-201ENST00000604443 754 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 MIR6849-201ENST00000618543 69 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 AL359091.1-201ENST00000449048 1734 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.65□□□□□ -1.67
VGLL1Q99990 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
VGLL1Q99990 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 AL449283.1-201ENST00000602631 3403 ntBASIC4.65□□□□□ -1.67
VGLL1Q99990 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
VGLL1Q99990 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 AC022325.1-201ENST00000502748 2199 ntBASIC4.64□□□□□ -1.67
VGLL1Q99990 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4.64□□□□□ -1.67
VGLL1Q99990 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.64□□□□□ -1.67
VGLL1Q99990 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.64□□□□□ -1.67
VGLL1Q99990 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 RNU6-819P-201ENST00000364116 107 ntBASIC4.64□□□□□ -1.67
VGLL1Q99990 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.64□□□□□ -1.67
VGLL1Q99990 AC092634.1-201ENST00000366505 199 ntBASIC4.64□□□□□ -1.67
VGLL1Q99990 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.64□□□□□ -1.67
VGLL1Q99990 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 UBE2V1P15-201ENST00000407776 448 ntBASIC4.64□□□□□ -1.67
VGLL1Q99990 RNA5SP155-201ENST00000411154 129 ntBASIC4.64□□□□□ -1.67
VGLL1Q99990 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VGLL1Q99990 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.64□□□□□ -1.67
VGLL1Q99990 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms