Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 OR10R3P-201ENST00000361688 942 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL451046.1-201ENST00000406097 534 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 SMC4P1-201ENST00000414479 527 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 ATP5LP2-201ENST00000440646 311 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 PFN1P8-201ENST00000497012 543 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC008945.1-201ENST00000505144 499 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 SCARNA18.1-201ENST00000516330 83 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC110056.1-201ENST00000525759 911 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 DPPA3P2-202ENST00000557188 1219 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 MIR4433B-201ENST00000581329 102 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AL162377.2-201ENST00000624532 337 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC016745.2-201ENST00000608834 3443 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC012254.3-201ENST00000591183 2117 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
VPS35Q96QK1 AP005435.3-201ENST00000531260 3198 ntBASIC5.98□□□□□ -1.45
VPS35Q96QK1 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS35Q96QK1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC006600.2-201ENST00000624834 2506 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC125336.1-201ENST00000508893 2827 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AP002512.4-202ENST00000641599 4530 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 MIR621-201ENST00000384919 96 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 SNORA77.2-201ENST00000408571 112 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 MYL6P5-201ENST00000412707 459 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 RPL35AP3-201ENST00000414680 288 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 NMD3P2-201ENST00000421815 761 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 GAPDHP75-201ENST00000433910 943 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC023245.1-201ENST00000468501 517 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 LINC00556-201ENST00000569603 412 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC023389.2-201ENST00000580031 955 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC005244.1-201ENST00000582566 339 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AL136131.3-201ENST00000607600 188 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 MIR6071-201ENST00000616741 78 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 AC096708.4-201ENST00000620563 552 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS35Q96QK1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 LINC02019-201ENST00000608605 2060 ntBASIC5.97□□□□□ -1.45
VPS35Q96QK1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS35Q96QK1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
VPS35Q96QK1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VPS35Q96QK1 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
VPS35Q96QK1 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms