Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC004777.1-201ENST00000624317 287 ntBASIC7.15□□□□□ -1.26
ERCC4Q92889 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC4Q92889 SEPT7P7-201ENST00000420492 1301 ntBASIC7.15□□□□□ -1.26
ERCC4Q92889 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
ERCC4Q92889 TMEM161BP1-201ENST00000457388 1457 ntBASIC7.15□□□□□ -1.27
ERCC4Q92889 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ERCC4Q92889 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.15□□□□□ -1.27
ERCC4Q92889 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ERCC4Q92889 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
ERCC4Q92889 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.15□□□□□ -1.27
ERCC4Q92889 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
ERCC4Q92889 AP001541.1-201ENST00000623322 1904 ntBASIC7.15□□□□□ -1.27
ERCC4Q92889 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
ERCC4Q92889 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC7.14□□□□□ -1.27
ERCC4Q92889 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC006509.1-201ENST00000420788 634 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 CDC42P6-201ENST00000421246 576 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 RPL31P11-201ENST00000426558 1558 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 RPL34P27-201ENST00000428810 349 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 AL645931.1-201ENST00000439737 410 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 AL022237.1-201ENST00000446663 358 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 RN7SKP198-201ENST00000459286 306 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 CABYRP1-201ENST00000465493 1045 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 OR9A1P-202ENST00000484361 945 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 RN7SL267P-201ENST00000485107 261 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
ERCC4Q92889 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 OR7E13P-201ENST00000526052 910 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC4Q92889 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC068620.3-201ENST00000602749 560 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 AL008582.1-201ENST00000609612 442 ntBASIC7.14□□□□□ -1.27
ERCC4Q92889 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ERCC4Q92889 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC7.14□□□□□ -1.27
ERCC4Q92889 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
ERCC4Q92889 CASC19-238ENST00000641523 1558 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ERCC4Q92889 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL391419.1-201ENST00000398901 1275 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL672212.1-201ENST00000422246 400 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC4Q92889 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 GTF2IP14-201ENST00000441415 586 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 HMGN1P32-201ENST00000441744 256 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 MOB1AP2-201ENST00000446060 614 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL020997.1-201ENST00000446554 349 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC4Q92889 RNA5SP318-201ENST00000516352 92 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 C1DP5-201ENST00000525775 383 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 TPRX1P1-201ENST00000557620 319 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.13□□□□□ -1.27
ERCC4Q92889 RN7SL32P-201ENST00000580514 281 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AC027334.1-201ENST00000603257 310 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AL049840.6-201ENST00000604583 345 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 AP000864.1-201ENST00000609424 650 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.13□□□□□ -1.27
ERCC4Q92889 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 LINC02495-203ENST00000636704 242 ntBASIC7.13□□□□□ -1.27
ERCC4Q92889 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC7.13□□□□□ -1.27
ERCC4Q92889 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ERCC4Q92889 AL731532.1-201ENST00000623972 4236 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms