Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SNORA17A-201ENST00000391185 133 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 RNA5SP156-201ENST00000410250 110 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 RNA5SP178-201ENST00000410380 128 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 RN7SKP206-201ENST00000410823 293 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC021876.1-201ENST00000425959 359 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AL353662.1-201ENST00000439099 327 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AL022237.1-201ENST00000446663 358 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC002553.3-201ENST00000453002 341 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC103563.5-201ENST00000455643 364 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC106872.4-201ENST00000510050 523 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 IGKV3D-25-201ENST00000519599 235 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 HNRNPCP1-201ENST00000556181 766 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 OR4H6P-201ENST00000563771 921 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 AC090236.2-201ENST00000587933 1101 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 MIR6729-201ENST00000618194 65 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 SNORA17.5-201ENST00000630429 132 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
TM9SF4Q92544 BIN2P1-201ENST00000504996 1530 ntBASIC5.78□□□□□ -1.48
TM9SF4Q92544 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TM9SF4Q92544 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 ZNF101P1-201ENST00000435701 1720 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 RNU1-134P-201ENST00000362935 165 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC005522.1-201ENST00000395416 346 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 U3.43-201ENST00000410734 213 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 CYP4F30P-202ENST00000420048 405 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC104843.2-201ENST00000427666 297 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 VN1R96P-201ENST00000446052 858 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 RPL31P15-201ENST00000449770 338 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC092865.4-201ENST00000477936 615 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 MTATP6P1-201ENST00000514057 681 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC073333.2-201ENST00000603589 769 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC100767.2-201ENST00000604840 693 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AP000894.4-201ENST00000610185 483 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 NF1P10-201ENST00000613227 742 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC010998.3-201ENST00000613871 631 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AL512652.1-201ENST00000619006 500 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC129915.3-201ENST00000634128 948 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 AC079753.1-201ENST00000623243 3868 ntBASIC5.77□□□□□ -1.49
TM9SF4Q92544 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TM9SF4Q92544 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TM9SF4Q92544 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF4Q92544 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF4Q92544 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF4Q92544 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF4Q92544 AC090220.1-201ENST00000593078 1699 ntBASIC5.76□□□□□ -1.49
TM9SF4Q92544 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TM9SF4Q92544 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
TM9SF4Q92544 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms