Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 EEF1A1P14-201ENST00000421195 1376 ntBASIC7.09□□□□□ -1.28
SNED1Q8TER0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
SNED1Q8TER0 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AP003175.1-201ENST00000641383 6658 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC007938.2-201ENST00000604666 2634 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 MRRFP1-201ENST00000435941 1675 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC015983.1-201ENST00000441577 373 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 FAR2P1-206ENST00000449736 709 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC079841.1-201ENST00000481228 950 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC092593.2-201ENST00000513866 913 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 AL137246.2-201ENST00000613439 662 ntBASIC7.08□□□□□ -1.28
SNED1Q8TER0 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SNED1Q8TER0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC7.08□□□□□ -1.28
SNED1Q8TER0 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 RNU1-106P-201ENST00000384382 164 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 MYL6P5-201ENST00000412707 459 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 TMA16P2-201ENST00000413187 601 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 RBMY2KP-201ENST00000418221 992 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 AL035090.1-201ENST00000454835 332 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC004129.2-201ENST00000457229 287 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 RPS21P4-201ENST00000487122 248 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 MIR4301-201ENST00000577203 66 ntBASIC7.07□□□□□ -1.28
SNED1Q8TER0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
SNED1Q8TER0 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.07□□□□□ -1.28
SNED1Q8TER0 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 HMGA1P8-201ENST00000414130 321 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 RPA2P2-201ENST00000419698 796 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 VDAC2P4-201ENST00000452925 711 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 LDHBP2-201ENST00000456969 1005 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 OR2AO1P-201ENST00000476497 403 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SNED1Q8TER0 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.06□□□□□ -1.28
SNED1Q8TER0 CCDC162P-202ENST00000368966 6751 ntBASIC7.06□□□□□ -1.28
SNED1Q8TER0 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms