Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 RPL29P33-201ENST00000587474 316 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 BNIP3P32-201ENST00000600015 554 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC011497.2-201ENST00000600255 639 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 Z99289.3-201ENST00000605586 594 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 MIR7109-201ENST00000613748 65 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC127071.2-201ENST00000623293 527 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC009120.7-201ENST00000623452 780 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC073342.3-201ENST00000624211 193 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 CDC27P2-201ENST00000425026 1922 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC083837.1-201ENST00000565297 2994 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 PSMC1P6-201ENST00000477233 1319 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 AC004023.1-201ENST00000561473 1744 ntBASIC6.22□□□□□ -1.41
SIMC1Q8NDZ2 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
SIMC1Q8NDZ2 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SIMC1Q8NDZ2 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
SIMC1Q8NDZ2 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
SIMC1Q8NDZ2 AC010168.2-201ENST00000562691 5428 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 TNPO1P2-201ENST00000426249 2665 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 OR4K17-201ENST00000315543 1032 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 OR2M1P-201ENST00000318104 951 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RNY3P9-201ENST00000384727 106 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RNU6-1000P-201ENST00000391066 106 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 MTND4LP13-201ENST00000425022 298 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC073508.1-201ENST00000428866 656 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RPL12P49-201ENST00000441100 121 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RRM2P4-201ENST00000441721 562 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC009237.1-201ENST00000442127 744 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 MTND1P33-201ENST00000446251 917 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL161722.1-201ENST00000446972 1032 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 NPM1P9-201ENST00000453156 844 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RPL23AP64-201ENST00000469465 435 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RN7SL37P-201ENST00000490461 307 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 OR9N1P-202ENST00000494289 481 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC009567.2-201ENST00000502989 349 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 PSMA2P2-201ENST00000504319 686 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RPEP1-201ENST00000504507 658 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RN7SKP183-201ENST00000517169 324 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 HMGN2P47-201ENST00000559378 272 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 BMS1P7-201ENST00000602440 1052 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL157899.1-201ENST00000604110 936 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL359704.2-201ENST00000604335 521 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 SNORD96A-201ENST00000606577 79 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL159169.2-201ENST00000610061 1269 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AP006248.3-201ENST00000623580 594 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC019080.5-201ENST00000624891 757 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AL645568.2-201ENST00000432815 1337 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 AC107021.2-201ENST00000567714 2095 ntBASIC6.21□□□□□ -1.42
SIMC1Q8NDZ2 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SIMC1Q8NDZ2 AC017002.4-201ENST00000604721 1525 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms