Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 CCNG1P1-201ENST00000406783 885 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL512422.1-201ENST00000407033 553 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC009237.5-201ENST00000414271 501 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL121878.1-201ENST00000418638 859 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC116050.1-206ENST00000423774 213 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 MTCO2P11-201ENST00000431069 680 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC009022.1-201ENST00000472115 496 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC100843.1-201ENST00000475372 550 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AP002884.1-201ENST00000479691 655 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL079303.1-201ENST00000486611 463 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL035404.1-201ENST00000497982 568 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 MTCYBP18-201ENST00000501056 747 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 HMGB1P28-201ENST00000507778 552 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC068134.3-201ENST00000513620 788 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 IGHVII-78-1-201ENST00000521105 269 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 RNF185-AS1-201ENST00000526089 353 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 OR5AQ1P-201ENST00000527596 927 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AP000879.2-201ENST00000530525 497 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TMEM106C-212ENST00000549288 321 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC023310.2-201ENST00000553844 547 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC027763.2-201ENST00000573755 539 ntTSL 4 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC087393.3-201ENST00000584971 166 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 BNIP3P8-201ENST00000597863 560 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC078795.3-201ENST00000602913 472 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC069304.2-201ENST00000605154 435 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC097534.2-201ENST00000609153 751 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 HTR1DP1-201ENST00000616500 888 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AC104162.1-201ENST00000430831 2382 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 RPS4XP5-202ENST00000449995 1334 ntBASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.5□□□□□ -1.21
DEPDC4Q8N2C3 AMZ2-205ENST00000577866 1492 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AC008555.1-201ENST00000561778 2757 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 LRP4-AS1-201ENST00000502049 1504 ntTSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TRIM51EP-201ENST00000524374 1516 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 OR2T4-202ENST00000366475 1047 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 Y_RNA.573-201ENST00000384763 105 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 MT-TS1-201ENST00000387416 69 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 TRBV5-1-201ENST00000390381 652 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 Y_RNA.598-201ENST00000410480 95 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 NONOP2-201ENST00000414613 1231 ntBASIC7.49□□□□□ -1.21
DEPDC4Q8N2C3 AL596448.1-201ENST00000415024 392 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms