Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 QRSL1P1-201ENST00000400977 1540 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 PSG10P-201ENST00000501199 1500 ntBASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC65Q8IXS2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC093225.1-201ENST00000506867 1408 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL161756.3-201ENST00000641216 2071 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC012078.1-201ENST00000405035 1646 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 RNU1-65P-201ENST00000363919 148 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 RPL34P27-201ENST00000428810 349 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 BX679664.2-201ENST00000439282 283 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL663074.2-201ENST00000440621 479 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC005077.1-201ENST00000449226 375 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 OSTCP1-201ENST00000455507 450 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 RN7SL269P-201ENST00000467795 305 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 snoU109.5-201ENST00000516231 132 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AP003396.4-201ENST00000527574 265 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 RPA2P1-201ENST00000556557 721 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC026826.3-201ENST00000561747 158 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AL021918.2-201ENST00000613415 194 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC245014.3-201ENST00000618589 347 ntBASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
CCDC65Q8IXS2 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.59□□□□□ -1.36
CCDC65Q8IXS2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.36
CCDC65Q8IXS2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC65Q8IXS2 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
CCDC65Q8IXS2 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.59□□□□□ -1.36
CCDC65Q8IXS2 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 UGT2B24P-201ENST00000514441 1597 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC125336.1-201ENST00000508893 2827 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 COX6B1P3-201ENST00000312310 260 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 SELENOWP1-201ENST00000322792 252 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 NPM1P37-201ENST00000403105 874 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 RPS14P4-201ENST00000415880 418 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 RPS4XP5-201ENST00000419038 768 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 KIF4CP-201ENST00000422742 1279 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC073410.1-201ENST00000435125 589 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 BMS1P10-201ENST00000443754 1120 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC068491.1-201ENST00000449539 1241 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 CFL1P4-201ENST00000451536 498 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC023194.2-201ENST00000465398 406 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC079080.1-201ENST00000479841 822 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 RBBP4P1-201ENST00000502424 1276 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 NPM1P21-201ENST00000513394 762 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC005244.1-201ENST00000582566 339 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AC009779.8-202ENST00000607990 932 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AL136228.1-201ENST00000622221 319 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AL596275.2-207ENST00000641188 675 ntBASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.58□□□□□ -1.36
CCDC65Q8IXS2 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RN7SKP77-201ENST00000363261 353 ntBASIC6.57□□□□□ -1.36
CCDC65Q8IXS2 RN7SKP128-201ENST00000364270 303 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms