Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HMGB1P29-201ENST00000505659 499 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC109811.2-201ENST00000509609 452 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RNU6-264P-201ENST00000517134 104 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 STH-201ENST00000537309 445 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AL512310.1-201ENST00000548639 172 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC037471.2-201ENST00000564941 598 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 TEX46-202ENST00000566855 510 ntAPPRIS P2 TSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 BNIP3P8-201ENST00000597863 560 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 VDAC1P8-210ENST00000610068 1251 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 RN7SL3-201ENST00000610674 299 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AL451054.3-201ENST00000611115 776 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC103974.2-201ENST00000611319 778 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 PCBP1-AS1-322ENST00000628147 553 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CORIN-207ENST00000505909 3018 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AMPD3-202ENST00000396553 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 VN2R3P-201ENST00000422626 1412 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 AC061975.5-201ENST00000584928 1441 ntBASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.07
SCUBE3Q8IX30 ACSL1-212ENST00000622937 4103 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 ZNF733P-202ENST00000444809 1573 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 RNU5F-6P-201ENST00000362979 116 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 SNORA71D-201ENST00000363484 134 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 RNU5E-5P-201ENST00000365379 116 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 TRBV5-3-201ENST00000390362 343 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AL356432.1-201ENST00000405809 419 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 ERMN-204ENST00000409925 556 ntTSL 4 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 CTSLP8-201ENST00000413075 967 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 NUP35P1-201ENST00000422734 947 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC018630.2-202ENST00000422992 927 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AL591212.2-201ENST00000433923 257 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AL121877.1-201ENST00000453704 622 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC233279.1-201ENST00000455300 423 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC010486.1-201ENST00000511793 424 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC093677.1-201ENST00000514414 678 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 MTCO1P30-201ENST00000515244 580 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 RN7SKP14-201ENST00000516000 329 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 OR5M7P-201ENST00000526140 972 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 SERPINA15P-201ENST00000529287 266 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC107954.1-201ENST00000565906 727 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 MIR4786-201ENST00000583954 80 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 AC005262.1-201ENST00000588562 362 ntBASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 DTNA-220ENST00000590831 847 ntTSL 2 BASIC8.35□□□□□ -1.07
SCUBE3Q8IX30 LINC01198-208ENST00000599175 560 ntTSL 5 BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms