Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 NPM1P5-201ENST00000557228 838 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 MIR1273E-201ENST00000581165 102 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AL953862.2-201ENST00000603089 820 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AL139254.3-201ENST00000641097 674 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 ZNF101P1-201ENST00000435701 1720 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 AC005261.2-201ENST00000593427 4258 ntBASIC6.72□□□□□ -1.33
HERC6Q8IVU3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
HERC6Q8IVU3 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
HERC6Q8IVU3 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
HERC6Q8IVU3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 OR2M1P-201ENST00000318104 951 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 FUNDC2P3-201ENST00000334716 533 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AL139415.1-201ENST00000424862 352 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 RSL24D1P8-201ENST00000434442 492 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 SUMO2P3-201ENST00000438311 288 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AL163193.1-201ENST00000444895 788 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 MORF4-201ENST00000447135 971 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC104849.1-201ENST00000462623 405 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC091965.3-201ENST00000506236 208 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC073581.1-201ENST00000519036 575 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 WBP1LP3-201ENST00000523033 208 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AP003168.1-201ENST00000530091 307 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 OOSP1P2-201ENST00000579644 351 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 KATNBL1P1-201ENST00000605192 748 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC120036.2-201ENST00000509729 1474 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 AC022325.1-201ENST00000502748 2199 ntBASIC6.71□□□□□ -1.34
HERC6Q8IVU3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HERC6Q8IVU3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC078880.4-201ENST00000617627 1749 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC022905.1-201ENST00000503430 3048 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 MIR105-2-201ENST00000385083 81 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 RNU6-564P-201ENST00000410983 104 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AL354890.1-201ENST00000413730 346 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 RPS7P8-201ENST00000418311 581 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 TRIM60P16-201ENST00000444048 694 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 RPL31P53-201ENST00000457065 348 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC025181.1-201ENST00000477507 416 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 EIF3LP3-201ENST00000495197 822 ntBASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.7□□□□□ -1.34
HERC6Q8IVU3 AC117525.1-201ENST00000515228 503 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 269.8 ms