| FOXP4 | Q8IVH2 | CREB5-201 | ENST00000357727 | 8532 nt | APPRIS P4 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PPIL1-201 | ENST00000373699 | 1739 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SDAD1-201 | ENST00000356260 | 3017 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ZNF761-203 | ENST00000454407 | 3967 nt | APPRIS P1 TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RPTN-201 | ENST00000316073 | 3569 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC092724.1-201 | ENST00000624623 | 3397 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CLVS1-203 | ENST00000518592 | 2880 nt | TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OR5B2-202 | ENST00000641342 | 2184 nt | APPRIS P1 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC010099.4-201 | ENST00000424515 | 1453 nt | TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SSX3-201 | ENST00000298396 | 1232 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RNU6-233P-201 | ENST00000410845 | 141 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OSBPL10-AS1-202 | ENST00000418728 | 458 nt | TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CA1-201 | ENST00000431316 | 1232 nt | APPRIS P1 TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC003991.1-210 | ENST00000434733 | 1048 nt | TSL 3 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC017074.2-201 | ENST00000439382 | 607 nt | TSL 2 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC079922.1-201 | ENST00000443291 | 359 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC006482.1-201 | ENST00000448898 | 273 nt | TSL 3 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LRRC37A14P-201 | ENST00000452297 | 462 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SYPL1-205 | ENST00000470347 | 1193 nt | TSL 3 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RN7SL214P-201 | ENST00000487317 | 265 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | NENFP3-201 | ENST00000503735 | 313 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RPL7L1P4-201 | ENST00000513004 | 707 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC01598-206 | ENST00000513381 | 499 nt | TSL 4 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PYDC2-201 | ENST00000518817 | 294 nt | APPRIS P1 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC103810.5-201 | ENST00000581622 | 560 nt | TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AL139099.4-201 | ENST00000614802 | 114 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PCBP1-AS1-282 | ENST00000625783 | 826 nt | TSL 5 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | EXPH5-203 | ENST00000525344 | 6542 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ZC3H7A-214 | ENST00000575984 | 2632 nt | TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PDE10A-203 | ENST00000539869 | 4401 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | MEF2C-202 | ENST00000424173 | 6336 nt | APPRIS P3 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ZNF101P1-201 | ENST00000435701 | 1720 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ADNP-202 | ENST00000371602 | 6115 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | FBXL13-208 | ENST00000456695 | 1605 nt | APPRIS P1 TSL 1 (best) BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CASC15-207 | ENST00000607048 | 1634 nt | TSL 2 BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CIR1P2-201 | ENST00000514821 | 1342 nt | BASIC | 7.01 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC02097-201 | ENST00000419257 | 2063 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC01504-201 | ENST00000436054 | 2078 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | MDM4-216 | ENST00000616250 | 9597 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ANKRD46-204 | ENST00000519597 | 2779 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AMOT-206 | ENST00000524145 | 3330 nt | APPRIS ALT2 TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AP002478.1-201 | ENST00000577848 | 1455 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CCDC80-201 | ENST00000206423 | 12430 nt | APPRIS P1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | KCNIP4-202 | ENST00000382148 | 2481 nt | APPRIS ALT1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OR2B6-201 | ENST00000244623 | 942 nt | APPRIS P1 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | TBC1D32-204 | ENST00000398212 | 3824 nt | APPRIS P2 TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SLC3A1-203 | ENST00000409294 | 792 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC015977.1-201 | ENST00000418887 | 292 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AK4P4-201 | ENST00000419465 | 646 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC073283.2-202 | ENST00000426892 | 591 nt | TSL 4 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC01501-201 | ENST00000427523 | 409 nt | TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC002504.1-201 | ENST00000438281 | 691 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RPL7L1P3-201 | ENST00000455249 | 689 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC011389.1-203 | ENST00000513790 | 573 nt | TSL 4 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | C5orf46-203 | ENST00000515291 | 573 nt | APPRIS ALT1 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OR7E158P-201 | ENST00000524483 | 910 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC01895-201 | ENST00000558690 | 404 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AL034374.2-201 | ENST00000605281 | 548 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AL049767.1-202 | ENST00000637826 | 242 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ZNF701-202 | ENST00000391785 | 2634 nt | APPRIS P3 TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PPP1R1C-201 | ENST00000280295 | 1636 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | C5orf64-203 | ENST00000505642 | 2970 nt | TSL 2 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINGO2-204 | ENST00000613945 | 2981 nt | APPRIS P1 TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC018765.1-201 | ENST00000623357 | 3446 nt | BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | FCHSD2-201 | ENST00000311172 | 4340 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC00309-201 | ENST00000431020 | 3307 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AP4S1-212 | ENST00000622409 | 4113 nt | APPRIS P1 TSL 3 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | CLASP2-205 | ENST00000461133 | 4814 nt | TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ANLN-202 | ENST00000396068 | 4661 nt | TSL 1 (best) BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | TESPA1-212 | ENST00000532804 | 2000 nt | APPRIS ALT2 TSL 5 BASIC | 7 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PRRC2C-202 | ENST00000367742 | 10366 nt | APPRIS ALT2 TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | GRIA2-204 | ENST00000393815 | 5260 nt | TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | TMC5-201 | ENST00000219821 | 3687 nt | APPRIS P3 TSL 1 (best) BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC124017.1-201 | ENST00000508112 | 1594 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | PDE4D-226 | ENST00000546160 | 7690 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | ROR1-AS1-202 | ENST00000424995 | 2189 nt | TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | NOL8-221 | ENST00000542053 | 3393 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | TLR6-201 | ENST00000381950 | 2938 nt | APPRIS P1 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RNA5SP394-201 | ENST00000364216 | 119 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | TANK-203 | ENST00000402568 | 878 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RN7SKP29-201 | ENST00000410957 | 272 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | MRPL53P1-201 | ENST00000414323 | 319 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OR4K3-201 | ENST00000425829 | 947 nt | APPRIS P1 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | LINC02528-202 | ENST00000434437 | 535 nt | TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC114982.2-201 | ENST00000461396 | 358 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | OARD1-207 | ENST00000468811 | 819 nt | APPRIS P1 TSL 2 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC124893.1-201 | ENST00000496247 | 545 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SERF1B-203 | ENST00000503931 | 569 nt | TSL 4 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | SERF1A-204 | ENST00000504458 | 569 nt | TSL 4 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC096577.1-202 | ENST00000515649 | 448 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RN7SKP248-201 | ENST00000516278 | 305 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC104212.3-201 | ENST00000522044 | 444 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC007569.1-202 | ENST00000547282 | 303 nt | TSL 3 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | MIR3176-201 | ENST00000582210 | 90 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC239809.3-208 | ENST00000611452 | 531 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC004477.3-201 | ENST00000614061 | 590 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | AC022467.1-201 | ENST00000614738 | 749 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RN7SL544P-201 | ENST00000617232 | 284 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | RN7SL763P-201 | ENST00000620922 | 284 nt | BASIC | 6.99 | □□□□□ -1.29 | | |
| FOXP4 | Q8IVH2 | UBA3-213 | ENST00000631029 | 123 nt | TSL 5 BASIC | 6.99 | □□□□□ -1.29 | | |