Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 KARSP1-201ENST00000451871 1752 ntBASIC7.74□□□□□ -1.17
LYSMD3Q7Z3D4 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LYSMD3Q7Z3D4 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
LYSMD3Q7Z3D4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC051619.3-201ENST00000560646 2426 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 Y_RNA.529-201ENST00000384586 119 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RPS3AP23-201ENST00000401762 784 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL353151.1-201ENST00000402406 604 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RPL23AP39-201ENST00000415533 405 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC092042.2-201ENST00000417304 331 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 LINC00993-201ENST00000420453 540 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RNGTTP1-201ENST00000420965 728 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ZYG11AP1-201ENST00000430329 837 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC002553.1-201ENST00000442828 802 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL139135.2-201ENST00000445040 433 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 SEPHS1P4-201ENST00000446112 1176 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RN7SL861P-201ENST00000473793 285 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL445187.1-201ENST00000502685 260 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC112184.1-201ENST00000505179 312 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RNU6-327P-201ENST00000516270 127 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 IGHV3-32-201ENST00000519182 355 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 GTF2IP22-201ENST00000554443 182 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC004825.1-201ENST00000555068 586 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC090971.3-201ENST00000557871 1041 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MIR3137-201ENST00000577367 75 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MIR4642-201ENST00000583943 82 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MIR548AB-201ENST00000584917 84 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC060780.3-201ENST00000589464 80 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 VN1R79P-201ENST00000593540 513 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CCDC162P-202ENST00000368966 6751 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ZMYM2-202ENST00000382871 5051 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC137056.2-201ENST00000624055 1958 ntBASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 CLK1-215ENST00000621181 1843 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC7.73□□□□□ -1.17
LYSMD3Q7Z3D4 AC009948.5-201ENST00000624360 4406 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 CRBN-203ENST00000432408 2203 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 NEPNP-201ENST00000404786 1371 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AIFM1-205ENST00000460436 1925 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AC022306.1-201ENST00000560489 1562 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 DNM1L-207ENST00000452533 4439 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 LINC00299-201ENST00000430192 1760 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 RNA5SP80-201ENST00000410475 111 ntBASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.72□□□□□ -1.17
LYSMD3Q7Z3D4 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms