Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AL121985.2-201ENST00000621192 555 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AL353898.2-201ENST00000623000 255 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC7.13□□□□□ -1.27
PCDH1Q08174 PCMTD1P7-201ENST00000634506 357 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 AL133320.1-201ENST00000621423 2352 ntBASIC7.13□□□□□ -1.27
PCDH1Q08174 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 CCDC125-203ENST00000396499 3615 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
PCDH1Q08174 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
PCDH1Q08174 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 NACAP1-201ENST00000419462 1555 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 VEZF1P1-201ENST00000423931 1541 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 SERPINA9-205ENST00000448305 1520 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 RNU6-500P-201ENST00000362349 107 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RN7SKP174-201ENST00000363803 330 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 MIR128-2-201ENST00000384893 84 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH1Q08174 RNA5SP297-201ENST00000391029 113 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 MIR548F1-201ENST00000408667 84 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 VN1R33P-201ENST00000411800 887 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 LINC01347-201ENST00000417964 355 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC231533.2-201ENST00000419045 978 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AL593856.1-201ENST00000419949 805 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 KCTD9P1-201ENST00000430462 1167 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RPSAP62-201ENST00000432596 833 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RPSAP32-201ENST00000432681 526 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC104698.1-201ENST00000435671 276 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH1Q08174 HMGN1P6-201ENST00000438508 291 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC093392.2-201ENST00000450682 337 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH1Q08174 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC026336.1-201ENST00000466577 351 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RPL34P22-201ENST00000468193 318 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RPL7AP56-201ENST00000476420 791 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC084878.1-201ENST00000480555 648 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 HMGB3P13-201ENST00000511263 607 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 MTCYBP44-201ENST00000514835 823 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 OR7E1P-201ENST00000533891 958 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.12□□□□□ -1.27
PCDH1Q08174 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 MIR4262-201ENST00000578394 54 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RN7SL786P-201ENST00000579130 298 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC008507.1-201ENST00000587506 734 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC083899.3-201ENST00000603413 594 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 RPS28P1-201ENST00000604589 187 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AL592221.1-201ENST00000605266 382 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AL159169.2-201ENST00000610061 1269 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC022743.1-201ENST00000624990 664 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PCDH1Q08174 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PCDH1Q08174 CASC19-212ENST00000641153 1287 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 CASC19-264ENST00000641912 1184 ntBASIC7.12□□□□□ -1.27
PCDH1Q08174 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PCDH1Q08174 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms