Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 RNA5SP77-201ENST00000365394 120 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 RPS3AP38-201ENST00000435889 763 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC128677.1-201ENST00000436016 442 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 OR3D1P-201ENST00000438288 955 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AL645936.1-201ENST00000441979 518 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 RPL12P31-201ENST00000478433 450 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 TRBV5-2-201ENST00000489095 273 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 KHDC1P1-201ENST00000511053 508 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 RNU2-45P-201ENST00000516068 187 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC063977.7-201ENST00000594454 337 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AF287957.1-201ENST00000607368 1595 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC089999.3-201ENST00000622440 577 ntBASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HIST1H1AQ02539 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HIST1H1AQ02539 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.59□□□□□ -1.68
HIST1H1AQ02539 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HIST1H1AQ02539 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.59□□□□□ -1.68
HIST1H1AQ02539 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC114774.1-201ENST00000507410 1770 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 HSPD1P7-201ENST00000447985 1686 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL133243.2-201ENST00000610331 1621 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC010086.1-201ENST00000437359 1052 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL663074.2-201ENST00000440621 479 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL162739.1-201ENST00000450606 307 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 HIGD1AP16-201ENST00000450986 258 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 RPL12P24-201ENST00000474907 486 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC117500.1-201ENST00000497352 755 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 snoU109.5-201ENST00000516231 132 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 CASP1P2-201ENST00000526830 1258 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AP004609.2-201ENST00000532177 190 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL359219.2-201ENST00000555184 348 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AC008555.7-201ENST00000605008 583 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.58□□□□□ -1.68
HIST1H1AQ02539 MIR6885-201ENST00000612241 66 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 GAPDHP41-201ENST00000613707 975 ntBASIC4.58□□□□□ -1.68
HIST1H1AQ02539 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms