Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.56
H3F3AP84243 AC130304.1-201ENST00000622942 2385 ntBASIC5.34□□□□□ -1.56
H3F3AP84243 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
H3F3AP84243 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
H3F3AP84243 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
H3F3AP84243 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
H3F3AP84243 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC079753.1-201ENST00000623243 3868 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 SELENOWP1-201ENST00000322792 252 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 RN7SKP77-201ENST00000363261 353 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 SNORD1C-201ENST00000363315 78 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 RN7SKP275-201ENST00000364626 301 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 VN1R12P-201ENST00000403778 876 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AL096800.1-201ENST00000405326 893 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.33□□□□□ -1.56
H3F3AP84243 CST12P-201ENST00000457644 362 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC090058.1-201ENST00000498788 435 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AC008629.2-201ENST00000503783 483 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 RN7SKP238-201ENST00000516483 249 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC079905.1-201ENST00000549280 475 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC134669.1-201ENST00000581275 672 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.33□□□□□ -1.56
H3F3AP84243 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.33□□□□□ -1.56
H3F3AP84243 MIR6793-201ENST00000612376 63 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.33□□□□□ -1.56
H3F3AP84243 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 ZNF101P1-201ENST00000435701 1720 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
H3F3AP84243 AC140134.1-201ENST00000511830 3544 ntBASIC5.33□□□□□ -1.56
H3F3AP84243 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
H3F3AP84243 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
H3F3AP84243 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 AC016739.1-201ENST00000405359 345 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 RPS26P38-201ENST00000414476 348 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3AP84243 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 AC110602.1-201ENST00000437414 318 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 TUBB4BP6-201ENST00000437576 479 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 RN7SL193P-201ENST00000491708 276 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.32□□□□□ -1.56
H3F3AP84243 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 TOMM20P1-201ENST00000534518 427 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.32□□□□□ -1.56
H3F3AP84243 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.32□□□□□ -1.56
H3F3AP84243 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.32□□□□□ -1.56
H3F3AP84243 AL049840.6-201ENST00000604583 345 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 AL499605.1-201ENST00000604628 403 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 uc_338.26-201ENST00000612659 160 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.32□□□□□ -1.56
H3F3AP84243 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.32□□□□□ -1.56
H3F3AP84243 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
H3F3AP84243 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms