Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC135983.3-201ENST00000528049 1226 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.05□□□□□ -1.6
CX3CL1P78423 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC027176.2-201ENST00000559166 746 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AC009120.3-201ENST00000563335 499 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC026898.1-201ENST00000586404 571 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CL1P78423 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC097372.4-201ENST00000625025 466 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 AL138960.2-201ENST00000625145 535 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.05□□□□□ -1.6
CX3CL1P78423 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.05□□□□□ -1.6
CX3CL1P78423 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CX3CL1P78423 AC110792.3-201ENST00000595906 1614 ntBASIC5.05□□□□□ -1.6
CX3CL1P78423 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL672167.2-201ENST00000377164 879 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 YWHAZP4-201ENST00000392459 708 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC003045.1-201ENST00000398779 713 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 RPL23AP17-201ENST00000401064 499 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AL133260.1-201ENST00000405720 405 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 RPL21P50-201ENST00000417698 477 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 DSTNP5-201ENST00000427921 523 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 MTND2P21-201ENST00000436242 1042 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 COX4I1P2-201ENST00000447446 547 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC099670.1-201ENST00000455141 783 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 RN7SL39P-201ENST00000462264 297 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 RN7SL643P-201ENST00000471845 291 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 OR9A1P-202ENST00000484361 945 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC093815.1-201ENST00000508637 280 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 NACAP5-201ENST00000509863 636 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC010343.2-201ENST00000510162 224 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC008055.1-201ENST00000547032 609 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 RN7SL475P-201ENST00000583379 298 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL589765.6-201ENST00000601909 549 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC005479.3-201ENST00000602790 431 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC024589.2-201ENST00000605642 1294 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AL450270.1-201ENST00000606160 391 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC092953.2-201ENST00000608000 699 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC253576.2-201ENST00000618815 580 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AL133370.2-201ENST00000619934 439 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC089999.3-201ENST00000622440 577 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC019080.5-201ENST00000624891 757 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms