Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 ATP5LP4-201ENST00000434169 307 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC027124.1-201ENST00000440852 466 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC245291.3-201ENST00000443400 292 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AL139135.2-201ENST00000445040 433 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 VPS25P1-201ENST00000455691 508 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 RN7SL492P-201ENST00000460700 295 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AL591473.1-201ENST00000464297 313 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC099340.1-201ENST00000475247 599 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 RPL5P14-201ENST00000494197 878 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.69□□□□□ -1.5
GTF2A1P52655 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 IGKV2D-38-201ENST00000518423 240 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.69□□□□□ -1.5
GTF2A1P52655 MIR4800-201ENST00000537353 80 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC007068.2-201ENST00000543168 395 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AL132640.2-202ENST00000559732 614 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC084759.1-201ENST00000561168 290 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.69□□□□□ -1.5
GTF2A1P52655 AC011193.2-201ENST00000582638 367 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 MIR5682-201ENST00000584864 76 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 NDUFB9P1-201ENST00000604683 510 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC007671.1-201ENST00000616957 830 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC091932.2-201ENST00000623014 291 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 SNX18P12-201ENST00000624821 759 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 AC100778.3-201ENST00000580060 1750 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 THAP12P8-201ENST00000447914 2115 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 PSMC1P6-201ENST00000477233 1319 ntBASIC5.69□□□□□ -1.5
GTF2A1P52655 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.69□□□□□ -1.5
GTF2A1P52655 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
GTF2A1P52655 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 RPL5P20-201ENST00000403848 896 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.68□□□□□ -1.5
GTF2A1P52655 CLIC4P3-201ENST00000422221 752 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.68□□□□□ -1.5
GTF2A1P52655 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.68□□□□□ -1.5
GTF2A1P52655 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 PHBP4-201ENST00000437447 837 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 SNRPBP1-201ENST00000443634 282 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.68□□□□□ -1.5
GTF2A1P52655 CBX5P1-201ENST00000468470 561 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 RN7SL273P-201ENST00000481561 299 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AL390198.2-201ENST00000510553 222 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AC021193.1-201ENST00000511607 420 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.68□□□□□ -1.5
GTF2A1P52655 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.68□□□□□ -1.5
GTF2A1P52655 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 SETP17-201ENST00000534163 817 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
GTF2A1P52655 AC091078.2-201ENST00000557145 559 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.68□□□□□ -1.5
GTF2A1P52655 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.68□□□□□ -1.5
GTF2A1P52655 MIR378C-201ENST00000578683 81 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.68□□□□□ -1.5
GTF2A1P52655 AL513327.3-201ENST00000602618 469 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 ACTG1P22-201ENST00000603793 1099 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 MIR665-201ENST00000635949 72 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
GTF2A1P52655 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
GTF2A1P52655 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
GTF2A1P52655 TET1P1-201ENST00000426627 2301 ntBASIC5.68□□□□□ -1.5
GTF2A1P52655 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
GTF2A1P52655 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 SAGE3P-201ENST00000619800 1635 ntBASIC5.67□□□□□ -1.5
GTF2A1P52655 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.67□□□□□ -1.5
GTF2A1P52655 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.67□□□□□ -1.5
GTF2A1P52655 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
GTF2A1P52655 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.67□□□□□ -1.5
GTF2A1P52655 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms