Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 U3.7-201ENST00000363668 216 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 RNA5SP211-201ENST00000365516 117 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC7.52□□□□□ -1.21
COL15A1P39059 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 FMO7P-201ENST00000436045 768 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 CYCSP51-201ENST00000443545 318 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 RNU6-615P-201ENST00000516065 106 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.52□□□□□ -1.21
COL15A1P39059 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.52□□□□□ -1.21
COL15A1P39059 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC7.52□□□□□ -1.21
COL15A1P39059 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.52□□□□□ -1.21
COL15A1P39059 uc_338.26-201ENST00000612659 160 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 OR11H2-202ENST00000641517 1085 ntBASIC7.52□□□□□ -1.21
COL15A1P39059 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL15A1P39059 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
COL15A1P39059 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.52□□□□□ -1.21
COL15A1P39059 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 AC109780.1-201ENST00000451768 1344 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AC053481.2-202ENST00000582394 1500 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 AC240504.1-201ENST00000395709 845 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 RN7SKP59-201ENST00000410520 314 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 RPS4XP5-201ENST00000419038 768 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.51□□□□□ -1.21
COL15A1P39059 HMGB3P24-201ENST00000433260 622 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.51□□□□□ -1.21
COL15A1P39059 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.51□□□□□ -1.21
COL15A1P39059 SDC4P-201ENST00000453285 601 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AC007386.1-201ENST00000455212 582 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC7.51□□□□□ -1.21
COL15A1P39059 SNORA48.9-201ENST00000516419 162 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AC008676.3-201ENST00000521237 435 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 AC007494.1-201ENST00000562293 760 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 TXNP4-201ENST00000575018 310 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.51□□□□□ -1.21
COL15A1P39059 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC7.51□□□□□ -1.21
COL15A1P39059 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 AC004808.2-201ENST00000627965 773 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC7.51□□□□□ -1.21
COL15A1P39059 AL359195.2-201ENST00000623657 4412 ntBASIC7.51□□□□□ -1.21
COL15A1P39059 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
COL15A1P39059 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
COL15A1P39059 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL15A1P39059 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
COL15A1P39059 POT1-202ENST00000393329 3950 ntTSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
COL15A1P39059 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL15A1P39059 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC7.5□□□□□ -1.21
COL15A1P39059 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.5□□□□□ -1.21
COL15A1P39059 OR6E1P-201ENST00000414424 923 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC7.5□□□□□ -1.21
COL15A1P39059 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.5□□□□□ -1.21
COL15A1P39059 SPRYD7P1-201ENST00000443861 570 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 AL157777.1-201ENST00000468100 304 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 RN7SL184P-201ENST00000488308 297 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.5□□□□□ -1.21
COL15A1P39059 IGBP1P1-201ENST00000554337 1009 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC7.5□□□□□ -1.21
COL15A1P39059 AC004890.3-201ENST00000605566 1095 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 AC004948.1-201ENST00000609858 672 ntBASIC7.5□□□□□ -1.21
COL15A1P39059 AC007204.2-201ENST00000615022 616 ntBASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms