Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.75□□□□□ -1.33
CIITAP33076 CUBNP2-201ENST00000443534 1139 ntBASIC6.75□□□□□ -1.33
CIITAP33076 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.75□□□□□ -1.33
CIITAP33076 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.75□□□□□ -1.33
CIITAP33076 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.75□□□□□ -1.33
CIITAP33076 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.75□□□□□ -1.33
CIITAP33076 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.75□□□□□ -1.33
CIITAP33076 OR4A42P-201ENST00000531397 938 ntBASIC6.75□□□□□ -1.33
CIITAP33076 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.75□□□□□ -1.33
CIITAP33076 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.75□□□□□ -1.33
CIITAP33076 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.75□□□□□ -1.33
CIITAP33076 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.75□□□□□ -1.33
CIITAP33076 NF1P10-201ENST00000613227 742 ntBASIC6.75□□□□□ -1.33
CIITAP33076 AL096712.1-201ENST00000614561 159 ntBASIC6.75□□□□□ -1.33
CIITAP33076 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.75□□□□□ -1.33
CIITAP33076 AL109620.1-201ENST00000618738 1197 ntBASIC6.75□□□□□ -1.33
CIITAP33076 AC063952.1-203ENST00000634410 658 ntBASIC6.75□□□□□ -1.33
CIITAP33076 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.75□□□□□ -1.33
CIITAP33076 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CIITAP33076 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CIITAP33076 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CIITAP33076 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.74□□□□□ -1.33
CIITAP33076 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 TMSB4XP2-201ENST00000335179 210 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.74□□□□□ -1.33
CIITAP33076 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 LYPLA1P3-201ENST00000402650 695 ntBASIC6.74□□□□□ -1.33
CIITAP33076 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CIITAP33076 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC097523.2-201ENST00000435551 652 ntBASIC6.74□□□□□ -1.33
CIITAP33076 RPS12P17-201ENST00000438591 377 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AL445687.2-201ENST00000458156 728 ntBASIC6.74□□□□□ -1.33
CIITAP33076 ACA64.4-201ENST00000459070 127 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC094085.1-201ENST00000468914 584 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.74□□□□□ -1.33
CIITAP33076 MTND3P6-201ENST00000485242 339 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 RNA5SP271-201ENST00000516700 88 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 WBP1LP3-201ENST00000523033 208 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.74□□□□□ -1.33
CIITAP33076 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.74□□□□□ -1.33
CIITAP33076 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 AC018690.1-201ENST00000608144 626 ntBASIC6.74□□□□□ -1.33
CIITAP33076 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.74□□□□□ -1.33
CIITAP33076 uc_338.26-201ENST00000612659 160 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AL021918.2-201ENST00000613415 194 ntBASIC6.74□□□□□ -1.33
CIITAP33076 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.74□□□□□ -1.33
CIITAP33076 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
CIITAP33076 HSPD1P8-201ENST00000400121 1658 ntBASIC6.74□□□□□ -1.33
CIITAP33076 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.74□□□□□ -1.33
CIITAP33076 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CIITAP33076 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CIITAP33076 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CIITAP33076 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CIITAP33076 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CIITAP33076 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.73□□□□□ -1.33
CIITAP33076 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.73□□□□□ -1.33
CIITAP33076 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CIITAP33076 RNU6-316P-201ENST00000391027 107 ntBASIC6.73□□□□□ -1.33
CIITAP33076 AL096800.1-201ENST00000405326 893 ntBASIC6.73□□□□□ -1.33
CIITAP33076 RNU4-64P-201ENST00000410795 131 ntBASIC6.73□□□□□ -1.33
CIITAP33076 SLC20A1P1-201ENST00000413906 956 ntBASIC6.73□□□□□ -1.33
CIITAP33076 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.73□□□□□ -1.33
CIITAP33076 RPS4XP5-201ENST00000419038 768 ntBASIC6.73□□□□□ -1.33
CIITAP33076 AL035660.1-201ENST00000422041 222 ntBASIC6.73□□□□□ -1.33
CIITAP33076 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.73□□□□□ -1.33
CIITAP33076 AC079807.1-201ENST00000429993 481 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 159.8 ms