Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BX323046.1-201ENST00000610145 535 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 AL645927.2-201ENST00000618350 349 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 AL445528.2-201ENST00000620582 470 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 MIR7159-201ENST00000620587 66 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC6A4P31645 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC6A4P31645 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SLC6A4P31645 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
SLC6A4P31645 AC010168.2-201ENST00000562691 5428 ntBASIC6.49□□□□□ -1.37
SLC6A4P31645 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC6A4P31645 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC6A4P31645 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
SLC6A4P31645 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.49□□□□□ -1.37
SLC6A4P31645 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.49□□□□□ -1.37
SLC6A4P31645 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
SLC6A4P31645 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 CDY5P-201ENST00000411487 1580 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 CDY9P-201ENST00000451397 1580 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.48□□□□□ -1.37
SLC6A4P31645 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SLC6A4P31645 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC007679.3-201ENST00000434035 414 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 RPS10P18-201ENST00000442662 495 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 RPL5P7-201ENST00000444235 813 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC092967.1-201ENST00000449016 481 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 SNX18P26-201ENST00000458433 740 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 RPL34P33-201ENST00000486062 334 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 OR7E99P-201ENST00000505750 922 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC005363.1-201ENST00000530779 351 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.48□□□□□ -1.37
SLC6A4P31645 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.48□□□□□ -1.37
SLC6A4P31645 MRPS21P8-201ENST00000569196 235 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AC233702.7-202ENST00000582941 211 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC091057.3-201ENST00000602684 733 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 HMGB1P51-201ENST00000605166 638 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AC022106.1-201ENST00000612834 766 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AC097641.3-201ENST00000613523 464 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC025016.1-201ENST00000616746 682 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 AC079298.2-201ENST00000623885 459 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AC099654.8-201ENST00000637757 681 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 BIN2P1-201ENST00000504996 1530 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.48□□□□□ -1.37
SLC6A4P31645 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SLC6A4P31645 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 PABPC1P8-201ENST00000452851 2086 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 EIF3EP1-201ENST00000433978 1316 ntBASIC6.48□□□□□ -1.37
SLC6A4P31645 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
SLC6A4P31645 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.48□□□□□ -1.37
SLC6A4P31645 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SLC6A4P31645 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SLC6A4P31645 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 FAM32BP-201ENST00000344033 333 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 RNU6-792P-201ENST00000363490 107 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 MIR421-201ENST00000365696 85 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SLC6A4P31645 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 MTCO2P1-201ENST00000424648 477 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC004854.1-201ENST00000440356 349 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 HIGD1AP16-201ENST00000450986 258 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AP002453.1-201ENST00000492327 668 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC015864.1-201ENST00000496512 544 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC096571.1-202ENST00000506634 735 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.47□□□□□ -1.37
SLC6A4P31645 TOMM20P1-201ENST00000534518 427 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AP001858.2-201ENST00000536213 601 ntBASIC6.47□□□□□ -1.37
SLC6A4P31645 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.47□□□□□ -1.37
SLC6A4P31645 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms