Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXC13P31276 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC13P31276 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC13P31276 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 AP005901.4-201ENST00000577336 569 ntBASIC6.41□□□□□ -1.38
HOXC13P31276 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.41□□□□□ -1.38
HOXC13P31276 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXC13P31276 FAM72A-208ENST00000607379 1139 ntBASIC6.41□□□□□ -1.38
HOXC13P31276 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.41□□□□□ -1.38
HOXC13P31276 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC13P31276 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HOXC13P31276 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.41□□□□□ -1.38
HOXC13P31276 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC13P31276 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXC13P31276 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXC13P31276 AP001541.1-201ENST00000623322 1904 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC13P31276 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC13P31276 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 AC093297.3-201ENST00000607056 2517 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 AC024651.2-201ENST00000562480 2098 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC13P31276 THAP12P8-201ENST00000447914 2115 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC13P31276 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 RNA5SP284-201ENST00000384547 118 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
HOXC13P31276 AL096711.1-201ENST00000404780 554 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 HMGA1P8-201ENST00000414130 321 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC13P31276 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC13P31276 CR383656.1-201ENST00000484916 377 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 RPL17P2-201ENST00000491913 451 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 MTCO3P42-201ENST00000509488 518 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 MTCO3P39-201ENST00000514812 518 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 RNA5SP271-201ENST00000516700 88 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.4□□□□□ -1.38
HOXC13P31276 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC13P31276 DUX4L52-201ENST00000549363 777 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC13P31276 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.4□□□□□ -1.38
HOXC13P31276 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 AP001823.1-201ENST00000604056 1003 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 AC022467.1-201ENST00000614738 749 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 AC126175.1-201ENST00000617041 758 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 FAM27E2-201ENST00000619668 403 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 MIR6719-201ENST00000622428 87 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 AC003992.1-201ENST00000635364 557 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 OR7A1P-202ENST00000641542 1158 ntBASIC6.4□□□□□ -1.38
HOXC13P31276 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC13P31276 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 AC233968.1-201ENST00000611212 1300 ntBASIC6.4□□□□□ -1.39
HOXC13P31276 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.4□□□□□ -1.39
HOXC13P31276 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.4□□□□□ -1.39
HOXC13P31276 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXC13P31276 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXC13P31276 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.4□□□□□ -1.39
HOXC13P31276 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC13P31276 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 HSPD1P7-201ENST00000447985 1686 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC13P31276 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXC13P31276 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC13P31276 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXC13P31276 RNU6-729P-201ENST00000384399 107 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC13P31276 AC116036.1-201ENST00000412199 367 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXC13P31276 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXC13P31276 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 AP000281.1-201ENST00000444036 316 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC13P31276 AC098583.1-201ENST00000480875 255 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 AC090958.1-201ENST00000511122 351 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXC13P31276 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC13P31276 SUMO2P19-201ENST00000518920 295 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC13P31276 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC13P31276 AP000619.2-201ENST00000546014 969 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 AC090022.1-201ENST00000546569 311 ntBASIC6.39□□□□□ -1.39
HOXC13P31276 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms