Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.48□□□□□ -1.05
PTPRMP28827 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.48□□□□□ -1.05
PTPRMP28827 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.48□□□□□ -1.05
PTPRMP28827 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC8.48□□□□□ -1.05
PTPRMP28827 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC8.48□□□□□ -1.05
PTPRMP28827 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.48□□□□□ -1.05
PTPRMP28827 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
PTPRMP28827 SALL4P7-201ENST00000555779 3120 ntBASIC8.47□□□□□ -1.05
PTPRMP28827 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPRMP28827 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPRMP28827 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 AL133243.4-201ENST00000623116 3109 ntBASIC8.47□□□□□ -1.05
PTPRMP28827 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPRMP28827 RPS27AP6-201ENST00000427962 448 ntBASIC8.47□□□□□ -1.05
PTPRMP28827 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPRMP28827 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC8.47□□□□□ -1.05
PTPRMP28827 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.47□□□□□ -1.05
PTPRMP28827 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPRMP28827 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPRMP28827 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 AC232271.1-201ENST00000602455 2715 ntBASIC8.47□□□□□ -1.05
PTPRMP28827 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 SLC5A1-204ENST00000543737 4752 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPRMP28827 PPP1R12B-204ENST00000391959 15431 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPRMP28827 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PTPRMP28827 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC8.47□□□□□ -1.05
PTPRMP28827 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.47□□□□□ -1.05
PTPRMP28827 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.46□□□□□ -1.05
PTPRMP28827 AC114947.2-201ENST00000565748 2125 ntBASIC8.46□□□□□ -1.05
PTPRMP28827 AC011493.1-201ENST00000596753 1632 ntBASIC8.46□□□□□ -1.05
PTPRMP28827 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC8.46□□□□□ -1.05
PTPRMP28827 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.46□□□□□ -1.05
PTPRMP28827 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC8.46□□□□□ -1.05
PTPRMP28827 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC8.46□□□□□ -1.05
PTPRMP28827 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC8.46□□□□□ -1.05
PTPRMP28827 BZW1P1-201ENST00000454901 1240 ntBASIC8.46□□□□□ -1.05
PTPRMP28827 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PTPRMP28827 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
PTPRMP28827 AC020910.2-201ENST00000603635 610 ntBASIC8.46□□□□□ -1.05
PTPRMP28827 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC8.46□□□□□ -1.05
PTPRMP28827 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.46□□□□□ -1.05
PTPRMP28827 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PTPRMP28827 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
PTPRMP28827 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PTPRMP28827 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.46□□□□□ -1.06
PTPRMP28827 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC8.46□□□□□ -1.06
PTPRMP28827 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.46□□□□□ -1.06
PTPRMP28827 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PTPRMP28827 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PTPRMP28827 RNA5SP211-201ENST00000365516 117 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.45□□□□□ -1.06
PTPRMP28827 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPRMP28827 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
PTPRMP28827 AC021678.3-201ENST00000517893 476 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 OR7E158P-201ENST00000524483 910 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC8.45□□□□□ -1.06
PTPRMP28827 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
PTPRMP28827 GARSP1-201ENST00000570895 719 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 AL021368.3-201ENST00000607119 578 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPRMP28827 AL450226.2-201ENST00000622913 439 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PTPRMP28827 AC011369.2-201ENST00000624423 1567 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PTPRMP28827 RNU6-398P-201ENST00000384143 109 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.45□□□□□ -1.06
PTPRMP28827 P2RY10P2-201ENST00000416730 913 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 RN7SL604P-201ENST00000492589 296 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms