Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AP000473.2-201ENST00000602659 1537 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.49□□□□□ -1.05
COL9A1P20849 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 AL591543.1-202ENST00000642095 4149 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 SCMH1-206ENST00000372596 3323 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 LRRC2-202ENST00000395905 5100 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 AC007638.2-201ENST00000574716 1740 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 FAT3-206ENST00000533797 7894 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 SLC22A24-202ENST00000417740 2098 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
COL9A1P20849 TAOK1-201ENST00000261716 12407 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 PSG9-205ENST00000443718 1421 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
COL9A1P20849 TRHDE-201ENST00000261180 10733 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 RNU6-359P-201ENST00000365466 108 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC117470.1-201ENST00000381974 330 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 RPL7-203ENST00000396466 762 ntTSL 3 BASIC8.49□□□□□ -1.05
COL9A1P20849 RN7SKP129-201ENST00000410288 299 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 HMGN1P34-201ENST00000413023 290 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 MRPL50P2-201ENST00000416821 482 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC8.49□□□□□ -1.05
COL9A1P20849 AC062016.2-201ENST00000420950 676 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC007559.1-201ENST00000428736 355 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.49□□□□□ -1.05
COL9A1P20849 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC8.49□□□□□ -1.05
COL9A1P20849 AC064862.5-201ENST00000440618 334 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AL356133.1-201ENST00000444762 372 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 RNU6-261P-201ENST00000459506 102 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 RNU6-1208P-201ENST00000459588 107 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 RPS27P12-201ENST00000464146 258 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC004801.2-201ENST00000468202 779 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC010655.3-201ENST00000478818 450 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 AC005741.1-201ENST00000511094 432 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC026700.1-201ENST00000512074 544 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 RNU2-46P-201ENST00000517038 113 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.49□□□□□ -1.05
COL9A1P20849 AC131935.1-201ENST00000524621 333 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.49□□□□□ -1.05
COL9A1P20849 AP001189.2-201ENST00000527320 189 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AP000790.1-201ENST00000528891 737 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC023442.1-201ENST00000531247 422 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AP004833.3-201ENST00000531893 322 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AL109628.1-201ENST00000556877 366 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 FAM30C-201ENST00000561158 410 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC022239.4-201ENST00000602626 504 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC068790.5-201ENST00000602741 355 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC006924.1-201ENST00000610750 559 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 pRNA.9-201ENST00000618609 89 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 AC020978.6-201ENST00000571197 3177 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 HNRNPK-201ENST00000351839 2652 ntAPPRIS ALT1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 AL592429.1-201ENST00000403909 1473 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 AC073342.2-201ENST00000595842 1800 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 AC007012.2-201ENST00000623206 1676 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 SLC5A9-201ENST00000236495 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
COL9A1P20849 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.49□□□□□ -1.05
COL9A1P20849 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.49□□□□□ -1.05
COL9A1P20849 OR52K3P-202ENST00000641797 1729 ntBASIC8.49□□□□□ -1.05
COL9A1P20849 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.48□□□□□ -1.05
COL9A1P20849 KLHL8-202ENST00000425278 4049 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 TXLNB-201ENST00000358430 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
COL9A1P20849 TRAF3IP2-AS1-209ENST00000532226 2191 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 ELAVL2-203ENST00000380117 2370 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 MARK2P10-201ENST00000454959 1437 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 NCAM1-228ENST00000621128 4698 ntTSL 5 BASIC8.48□□□□□ -1.05
COL9A1P20849 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC8.48□□□□□ -1.05
COL9A1P20849 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
COL9A1P20849 RNU1-39P-201ENST00000383897 165 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 RNU6-1222P-201ENST00000384615 107 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 MIR16-1-201ENST00000385271 89 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
COL9A1P20849 RPL23AP47-201ENST00000408017 460 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.48□□□□□ -1.05
COL9A1P20849 AC013404.1-201ENST00000413068 249 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
COL9A1P20849 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC8.48□□□□□ -1.05
COL9A1P20849 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC8.48□□□□□ -1.05
COL9A1P20849 NPM1P39-201ENST00000449818 867 ntBASIC8.48□□□□□ -1.05
COL9A1P20849 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms