Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 AC069154.1-201ENST00000432914 542 ntBASIC5.99□□□□□ -1.45
MSH3P20585 AL136455.1-201ENST00000441083 1240 ntBASIC5.99□□□□□ -1.45
MSH3P20585 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 AC023194.2-201ENST00000465398 406 ntBASIC5.99□□□□□ -1.45
MSH3P20585 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 RPL23AP40-201ENST00000487630 390 ntBASIC5.99□□□□□ -1.45
MSH3P20585 RBBP4P1-201ENST00000502424 1276 ntBASIC5.99□□□□□ -1.45
MSH3P20585 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.99□□□□□ -1.45
MSH3P20585 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.99□□□□□ -1.45
MSH3P20585 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 AC016583.1-201ENST00000624221 2431 ntBASIC5.99□□□□□ -1.45
MSH3P20585 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.99□□□□□ -1.45
MSH3P20585 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
MSH3P20585 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
MSH3P20585 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 AL354854.1-201ENST00000455940 1363 ntBASIC5.98□□□□□ -1.45
MSH3P20585 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MSH3P20585 MIR130B-202ENST00000385018 82 ntBASIC5.98□□□□□ -1.45
MSH3P20585 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
MSH3P20585 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.98□□□□□ -1.45
MSH3P20585 SNRPEP6-201ENST00000407465 277 ntBASIC5.98□□□□□ -1.45
MSH3P20585 PTCD2P2-201ENST00000415579 1095 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 AC021876.1-201ENST00000425959 359 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AL365220.1-201ENST00000432923 399 ntBASIC5.98□□□□□ -1.45
MSH3P20585 ATP5LP2-201ENST00000440646 311 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 AC092865.4-201ENST00000477936 615 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AP002884.1-201ENST00000479691 655 ntBASIC5.98□□□□□ -1.45
MSH3P20585 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 RN7SKP238-201ENST00000516483 249 ntBASIC5.98□□□□□ -1.45
MSH3P20585 RNU6-551P-201ENST00000516661 103 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 AP003396.4-201ENST00000527574 265 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.98□□□□□ -1.45
MSH3P20585 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 HNRNPCP1-201ENST00000556181 766 ntBASIC5.98□□□□□ -1.45
MSH3P20585 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 AC008507.3-201ENST00000585753 472 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 MIR132-201ENST00000591554 101 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.98□□□□□ -1.45
MSH3P20585 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 AC068768.2-201ENST00000602352 343 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 AC245014.3-201ENST00000618589 347 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC069234.4-201ENST00000621276 412 ntBASIC5.98□□□□□ -1.45
MSH3P20585 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.98□□□□□ -1.45
MSH3P20585 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 AC008627.1-201ENST00000517511 1704 ntBASIC5.98□□□□□ -1.45
MSH3P20585 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 AL121768.1-201ENST00000613917 2544 ntBASIC5.98□□□□□ -1.45
MSH3P20585 MTCO1P8-201ENST00000416914 1523 ntBASIC5.98□□□□□ -1.45
MSH3P20585 LYARP1-201ENST00000436977 1501 ntBASIC5.98□□□□□ -1.45
MSH3P20585 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 IFIT1P1-201ENST00000400497 1449 ntBASIC5.98□□□□□ -1.45
MSH3P20585 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
MSH3P20585 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.98□□□□□ -1.45
MSH3P20585 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.98□□□□□ -1.45
MSH3P20585 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
MSH3P20585 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.97□□□□□ -1.45
MSH3P20585 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms