Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LARP1BP3-201ENST00000437229 869 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC096632.2-201ENST00000438139 1239 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC004865.1-201ENST00000442276 1003 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC7.49□□□□□ -1.21
NFKB1P19838 ATP5G1P6-201ENST00000451206 412 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC013429.1-201ENST00000456604 422 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 RPL34P22-201ENST00000468193 318 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 RPL7P17-201ENST00000470927 724 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 RPL22-208ENST00000497965 786 ntTSL 2 BASIC7.49□□□□□ -1.21
NFKB1P19838 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NFKB1P19838 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC7.49□□□□□ -1.21
NFKB1P19838 AC147055.4-201ENST00000504399 745 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.49□□□□□ -1.21
NFKB1P19838 RN7SKP141-201ENST00000516167 338 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 RNU6-506P-201ENST00000516553 94 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC7.49□□□□□ -1.21
NFKB1P19838 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.49□□□□□ -1.21
NFKB1P19838 SAA3P-201ENST00000533267 365 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC7.49□□□□□ -1.21
NFKB1P19838 GLYCAM1-201ENST00000546596 285 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC004217.3-201ENST00000551552 878 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC074029.1-201ENST00000552531 1044 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC007262.1-201ENST00000604099 321 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AL121757.2-201ENST00000611223 313 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC007014.2-201ENST00000615581 479 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 AC022509.4-201ENST00000621404 572 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.49□□□□□ -1.21
NFKB1P19838 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NFKB1P19838 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NFKB1P19838 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NFKB1P19838 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NFKB1P19838 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NFKB1P19838 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NFKB1P19838 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.49□□□□□ -1.21
NFKB1P19838 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NFKB1P19838 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NFKB1P19838 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 COPS3-203ENST00000439936 1394 ntTSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NFKB1P19838 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 SNORA72.1-201ENST00000363485 129 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 RNA5SP260-201ENST00000363849 111 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 RNU6-31P-201ENST00000384388 108 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NFKB1P19838 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 OR6C69P-201ENST00000394268 893 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 LSM5-202ENST00000409292 538 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 VDAC1P2-201ENST00000423609 850 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 ATP5F1P1-201ENST00000433775 569 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 RPL23AP76-201ENST00000441860 458 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 MTCO1P18-201ENST00000455518 1419 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC117395.2-201ENST00000463122 1128 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC040975.1-201ENST00000472104 316 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 RPL7AP56-201ENST00000476420 791 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AC079382.1-201ENST00000493346 557 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 HMGB3P13-201ENST00000511263 607 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 SMARCE1P4-201ENST00000523647 241 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
NFKB1P19838 EIF5A2P1-201ENST00000564027 460 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AC090826.1-203ENST00000569235 490 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 AC127024.5-201ENST00000580085 462 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.48□□□□□ -1.21
NFKB1P19838 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.48□□□□□ -1.21
NFKB1P19838 C8orf59P2-201ENST00000603441 271 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC108861.1-201ENST00000611634 585 ntTSL 4 BASIC7.48□□□□□ -1.21
NFKB1P19838 AC026951.2-201ENST00000613847 241 ntBASIC7.48□□□□□ -1.21
NFKB1P19838 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
NFKB1P19838 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC7.48□□□□□ -1.21
NFKB1P19838 uc_338.21-201ENST00000622458 147 ntBASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms