Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 BX679664.2-201ENST00000439282 283 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 AC019185.1-201ENST00000442718 389 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.57□□□□□ -1.2
COL3A1P02461 AC005297.1-201ENST00000444765 862 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC7.57□□□□□ -1.2
COL3A1P02461 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.57□□□□□ -1.2
COL3A1P02461 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC7.57□□□□□ -1.2
COL3A1P02461 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.57□□□□□ -1.2
COL3A1P02461 IGBP1P1-201ENST00000554337 1009 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.57□□□□□ -1.2
COL3A1P02461 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.57□□□□□ -1.2
COL3A1P02461 AC020763.5-201ENST00000623298 430 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC7.57□□□□□ -1.2
COL3A1P02461 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
COL3A1P02461 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 AC087516.1-201ENST00000561236 2428 ntBASIC7.57□□□□□ -1.2
COL3A1P02461 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
COL3A1P02461 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
COL3A1P02461 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 AL391361.1-201ENST00000405580 489 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 RN7SKP229-201ENST00000410465 302 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.56□□□□□ -1.2
COL3A1P02461 RN7SL466P-201ENST00000497546 295 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.56□□□□□ -1.2
COL3A1P02461 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 OR7A1P-201ENST00000601206 970 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 IMMP1LP3-201ENST00000604197 224 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 AC109309.2-201ENST00000612597 332 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 CIR1P2-201ENST00000514821 1342 ntBASIC7.56□□□□□ -1.2
COL3A1P02461 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.56□□□□□ -1.2
COL3A1P02461 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
COL3A1P02461 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.56□□□□□ -1.2
COL3A1P02461 RN7SKP124-201ENST00000364730 341 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 AL133173.1-201ENST00000423458 397 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 AK3P5-201ENST00000432033 519 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 AC092473.1-201ENST00000441098 221 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 AP000547.1-201ENST00000454360 617 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 RANP1-206ENST00000455094 651 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.55□□□□□ -1.2
COL3A1P02461 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 HIRAP1-201ENST00000605318 787 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.55□□□□□ -1.2
COL3A1P02461 AL035661.1-201ENST00000620459 1144 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 AL034549.2-201ENST00000618285 3373 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
COL3A1P02461 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.55□□□□□ -1.2
COL3A1P02461 RNA5SP183-201ENST00000362452 119 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 U3.2-201ENST00000362981 210 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 SNORA70.9-201ENST00000384370 135 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 PRUNEP1-201ENST00000425846 705 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 AL035090.1-201ENST00000454835 332 ntBASIC7.55□□□□□ -1.2
COL3A1P02461 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.55□□□□□ -1.2
COL3A1P02461 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC7.55□□□□□ -1.2
COL3A1P02461 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC7.55□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms