Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 LRRC37A14P-201ENST00000452297 462 ntBASIC5.78□□□□□ -1.48
TNFP01375 RPS27AP2-201ENST00000457576 465 ntBASIC5.78□□□□□ -1.48
TNFP01375 PFN1P6-201ENST00000476786 399 ntBASIC5.78□□□□□ -1.48
TNFP01375 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 OR7E158P-201ENST00000524483 910 ntBASIC5.78□□□□□ -1.48
TNFP01375 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.78□□□□□ -1.48
TNFP01375 GARSP1-201ENST00000570895 719 ntBASIC5.78□□□□□ -1.48
TNFP01375 TXNP4-201ENST00000575018 310 ntBASIC5.78□□□□□ -1.48
TNFP01375 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 MIR132-201ENST00000591554 101 ntBASIC5.78□□□□□ -1.48
TNFP01375 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.78□□□□□ -1.48
TNFP01375 AL445670.1-201ENST00000618889 801 ntBASIC5.78□□□□□ -1.48
TNFP01375 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
TNFP01375 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.78□□□□□ -1.48
TNFP01375 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TNFP01375 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.78□□□□□ -1.48
TNFP01375 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.48
TNFP01375 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 OR52B5P-204ENST00000641744 3467 ntBASIC5.77□□□□□ -1.49
TNFP01375 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TNFP01375 SNORA51.1-201ENST00000363243 140 ntBASIC5.77□□□□□ -1.49
TNFP01375 RNA5SP242-201ENST00000364171 118 ntBASIC5.77□□□□□ -1.49
TNFP01375 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 AC093155.2-201ENST00000420734 937 ntBASIC5.77□□□□□ -1.49
TNFP01375 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 AL731534.1-201ENST00000434711 269 ntBASIC5.77□□□□□ -1.49
TNFP01375 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.77□□□□□ -1.49
TNFP01375 AC023141.9-201ENST00000458734 412 ntBASIC5.77□□□□□ -1.49
TNFP01375 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.77□□□□□ -1.49
TNFP01375 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.77□□□□□ -1.49
TNFP01375 AC027544.3-201ENST00000535082 757 ntBASIC5.77□□□□□ -1.49
TNFP01375 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.77□□□□□ -1.49
TNFP01375 AC022404.1-201ENST00000555320 273 ntBASIC5.77□□□□□ -1.49
TNFP01375 AC010547.6-201ENST00000571789 193 ntBASIC5.77□□□□□ -1.49
TNFP01375 AC020978.7-201ENST00000575953 1187 ntBASIC5.77□□□□□ -1.49
TNFP01375 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.77□□□□□ -1.49
TNFP01375 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.77□□□□□ -1.49
TNFP01375 AC015802.2-201ENST00000589690 189 ntBASIC5.77□□□□□ -1.49
TNFP01375 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.77□□□□□ -1.49
TNFP01375 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
TNFP01375 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TNFP01375 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
TNFP01375 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
TNFP01375 OLMALINC-203ENST00000641087 3779 ntBASIC5.77□□□□□ -1.49
TNFP01375 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
TNFP01375 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 MTCO1P11-201ENST00000429111 1528 ntBASIC5.76□□□□□ -1.49
TNFP01375 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
TNFP01375 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
TNFP01375 RN7SKP293-201ENST00000411389 296 ntBASIC5.76□□□□□ -1.49
TNFP01375 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.76□□□□□ -1.49
TNFP01375 DNAJC19P5-201ENST00000443295 316 ntBASIC5.76□□□□□ -1.49
TNFP01375 AC093166.4-201ENST00000457867 318 ntBASIC5.76□□□□□ -1.49
TNFP01375 RPSAP39-201ENST00000467439 883 ntBASIC5.76□□□□□ -1.49
TNFP01375 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 AL136038.1-201ENST00000497246 351 ntBASIC5.76□□□□□ -1.49
TNFP01375 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 RN7SKP288-201ENST00000516227 268 ntBASIC5.76□□□□□ -1.49
TNFP01375 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.76□□□□□ -1.49
TNFP01375 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms