Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AL035690.1-201ENST00000490892 383 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 CCNHP1-201ENST00000513311 678 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.39□□□□□ -1.55
LMX1BO60663 SNORA81.2-201ENST00000516868 170 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC090826.1-203ENST00000569235 490 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 AC012146.2-201ENST00000576545 416 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC090330.1-201ENST00000588646 764 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 AP001437.1-201ENST00000608783 456 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC022106.1-201ENST00000612834 766 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 AC008147.4-201ENST00000617570 1204 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 FO681491.1-202ENST00000623392 737 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC073488.6-201ENST00000632293 754 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC106858.1-201ENST00000637497 429 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.39□□□□□ -1.55
LMX1BO60663 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMX1BO60663 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LMX1BO60663 CCNT2P1-201ENST00000423082 1315 ntBASIC5.39□□□□□ -1.55
LMX1BO60663 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.39□□□□□ -1.55
LMX1BO60663 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LMX1BO60663 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.39□□□□□ -1.55
LMX1BO60663 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.38□□□□□ -1.55
LMX1BO60663 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 RNU1-59P-201ENST00000364829 162 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 SNORA43.1-201ENST00000364863 140 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 AL121835.1-201ENST00000404250 354 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 DHFRP2-201ENST00000414224 547 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPS26P38-201ENST00000414476 348 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 RPL21P50-201ENST00000417698 477 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 AC092651.1-201ENST00000426110 312 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AC016027.5-201ENST00000427227 210 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPL34P27-201ENST00000428810 349 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPSAP65-201ENST00000429660 595 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 MTND4P15-201ENST00000437913 1033 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPL6P30-201ENST00000443382 862 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 SETP20-201ENST00000457046 852 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RN7SL214P-201ENST00000487317 265 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AL133372.1-201ENST00000493565 745 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 AC010343.2-201ENST00000510162 224 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPA2P3-201ENST00000533268 770 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.38□□□□□ -1.55
LMX1BO60663 AC008055.1-201ENST00000547032 609 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.38□□□□□ -1.55
LMX1BO60663 MTND4LP25-201ENST00000570218 163 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 MIR132-201ENST00000591554 101 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 RPSAP75-201ENST00000605848 301 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AL591167.1-201ENST00000607321 456 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 U1.25-201ENST00000614085 162 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AC104307.1-201ENST00000616142 196 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 U1.34-201ENST00000618578 162 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 U1.31-201ENST00000620022 160 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AL137067.2-201ENST00000621202 131 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AP003400.2-201ENST00000624036 666 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 SNX18P12-201ENST00000624821 759 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.38□□□□□ -1.55
LMX1BO60663 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 CR383656.5-201ENST00000547616 1340 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
LMX1BO60663 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LMX1BO60663 AL359955.1-201ENST00000455242 3275 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.38□□□□□ -1.55
LMX1BO60663 LYARP1-201ENST00000436977 1501 ntBASIC5.38□□□□□ -1.55
LMX1BO60663 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms