Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.68□□□□□ -1.66
SSSCA1O60232 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SSSCA1O60232 SEPT14P12-201ENST00000442280 560 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC023141.8-201ENST00000442554 208 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.68□□□□□ -1.66
SSSCA1O60232 CBX1P2-201ENST00000453841 458 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.68□□□□□ -1.66
SSSCA1O60232 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC095052.1-201ENST00000509955 863 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.68□□□□□ -1.66
SSSCA1O60232 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 OR4A17P-201ENST00000526032 904 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC124891.1-201ENST00000536322 519 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.68□□□□□ -1.66
SSSCA1O60232 AC025283.1-201ENST00000572039 734 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC090286.3-201ENST00000573133 187 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC006120.1-201ENST00000579375 546 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 MIR378H-201ENST00000579966 83 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSSCA1O60232 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSSCA1O60232 MIR4732-201ENST00000581873 76 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 AL390877.1-201ENST00000605704 214 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AC018690.1-201ENST00000608144 626 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL162574.1-201ENST00000615702 950 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 AL035661.1-201ENST00000620459 1144 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 MIR6503-201ENST00000622884 86 ntBASIC4.68□□□□□ -1.66
SSSCA1O60232 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SSSCA1O60232 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SSSCA1O60232 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.68□□□□□ -1.66
SSSCA1O60232 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 USP40-202ENST00000409945 1946 ntTSL 2 BASIC4.68□□□□□ -1.66
SSSCA1O60232 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SSSCA1O60232 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SSSCA1O60232 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 CAP1P2-201ENST00000417455 1409 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 Y_RNA.209-201ENST00000364156 111 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 RNA5SP85-201ENST00000365378 119 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 MRPL32P1-201ENST00000406301 247 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 UBTFL2-201ENST00000411859 1191 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.67□□□□□ -1.66
SSSCA1O60232 OR6R1P-201ENST00000431838 940 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AL445928.1-201ENST00000435545 222 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC02210-201ENST00000444561 288 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 FTLP8-201ENST00000446770 267 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 NPM1P9-201ENST00000453156 844 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.67□□□□□ -1.66
SSSCA1O60232 RN7SL83P-201ENST00000468131 297 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.67□□□□□ -1.66
SSSCA1O60232 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 RPS7P6-201ENST00000485777 579 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 NPM1P28-201ENST00000492269 840 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC110056.1-201ENST00000525759 911 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC137627.1-201ENST00000545761 289 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 HMGN2P47-201ENST00000559378 272 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC036176.3-201ENST00000602456 418 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.67□□□□□ -1.66
SSSCA1O60232 AC004839.1-201ENST00000610269 501 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 AL021918.2-201ENST00000613415 194 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 MIR6726-201ENST00000613751 61 ntBASIC4.67□□□□□ -1.66
SSSCA1O60232 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SSSCA1O60232 AL357562.1-201ENST00000624911 609 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms