Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-157P-201ENST00000383957 107 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AL590084.2-201ENST00000401481 382 ntBASIC7.48□□□□□ -1.21
SOX1O00570 ZNF603P-201ENST00000405613 487 ntBASIC7.48□□□□□ -1.21
SOX1O00570 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX1O00570 PNRC2P1-201ENST00000423940 420 ntBASIC7.48□□□□□ -1.21
SOX1O00570 CENPIP1-201ENST00000425713 902 ntBASIC7.48□□□□□ -1.21
SOX1O00570 DPRXP1-201ENST00000426312 460 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX1O00570 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX1O00570 AC244505.3-201ENST00000454598 187 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AL109741.2-201ENST00000455561 343 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC026348.1-201ENST00000462549 1053 ntBASIC7.48□□□□□ -1.21
SOX1O00570 RN7SL654P-201ENST00000479178 292 ntBASIC7.48□□□□□ -1.21
SOX1O00570 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 SUMO2P17-201ENST00000504438 285 ntBASIC7.48□□□□□ -1.21
SOX1O00570 DSTNP2-201ENST00000504533 515 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC008565.1-201ENST00000509046 885 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.48□□□□□ -1.21
SOX1O00570 MEF2C-222ENST00000514028 3393 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 AC244502.2-201ENST00000543361 851 ntBASIC7.48□□□□□ -1.21
SOX1O00570 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 AC010198.2-201ENST00000550612 259 ntBASIC7.48□□□□□ -1.21
SOX1O00570 CYCSP38-201ENST00000559840 322 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC7.48□□□□□ -1.21
SOX1O00570 CEBPG-202ENST00000585933 3845 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SOX1O00570 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 VN1R82P-201ENST00000601481 356 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AL109618.2-201ENST00000605527 211 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC097381.3-201ENST00000608962 462 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC012409.3-201ENST00000611343 981 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AL359314.1-201ENST00000616913 261 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC009878.1-201ENST00000621819 340 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 AC024595.1-201ENST00000623088 387 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AC130456.6-201ENST00000623745 765 ntBASIC7.48□□□□□ -1.21
SOX1O00570 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
SOX1O00570 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 AP000641.1-201ENST00000531988 1639 ntBASIC7.48□□□□□ -1.21
SOX1O00570 AL450426.1-201ENST00000635678 1602 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 AC006042.3-201ENST00000454684 1469 ntBASIC7.48□□□□□ -1.21
SOX1O00570 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 CTAGE3P-201ENST00000454280 2404 ntBASIC7.48□□□□□ -1.21
SOX1O00570 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 EFCAB7-201ENST00000371088 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 THAP12P6-201ENST00000431978 2310 ntBASIC7.47□□□□□ -1.21
SOX1O00570 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SOX1O00570 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 GTF2H1-201ENST00000265963 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 CUL4AP1-201ENST00000514750 1863 ntBASIC7.47□□□□□ -1.21
SOX1O00570 CDH18-203ENST00000502796 2386 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 OR52K3P-202ENST00000641797 1729 ntBASIC7.47□□□□□ -1.21
SOX1O00570 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.47□□□□□ -1.21
SOX1O00570 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.47□□□□□ -1.21
SOX1O00570 AC004520.1-201ENST00000608362 1413 ntBASIC7.47□□□□□ -1.21
SOX1O00570 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 RNU6-413P-201ENST00000384115 107 ntBASIC7.47□□□□□ -1.21
SOX1O00570 RNU6-932P-201ENST00000391108 106 ntBASIC7.47□□□□□ -1.21
SOX1O00570 RN7SKP254-201ENST00000410685 310 ntBASIC7.47□□□□□ -1.21
SOX1O00570 BTF3P8-201ENST00000414577 526 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.47□□□□□ -1.21
SOX1O00570 AC098592.1-201ENST00000419352 333 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC006960.1-201ENST00000419980 153 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC012519.1-201ENST00000424588 610 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.47□□□□□ -1.21
SOX1O00570 AL354707.3-201ENST00000427308 331 ntBASIC7.47□□□□□ -1.21
SOX1O00570 MTND6P12-201ENST00000428247 522 ntBASIC7.47□□□□□ -1.21
SOX1O00570 PNKDP1-201ENST00000435914 430 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 MTCYBP42-201ENST00000444653 1130 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AURKAPS1-201ENST00000451805 1212 ntBASIC7.47□□□□□ -1.21
SOX1O00570 RPL30P6-201ENST00000475925 342 ntBASIC7.47□□□□□ -1.21
SOX1O00570 RPL12P31-201ENST00000478433 450 ntBASIC7.47□□□□□ -1.21
SOX1O00570 RN7SL273P-201ENST00000481561 299 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC069528.1-202ENST00000482888 637 ntBASIC7.47□□□□□ -1.21
SOX1O00570 PSMA2P2-201ENST00000504319 686 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC093870.1-201ENST00000506837 213 ntBASIC7.47□□□□□ -1.21
SOX1O00570 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SOX1O00570 AC109464.2-201ENST00000510242 943 ntBASIC7.47□□□□□ -1.21
SOX1O00570 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC7.47□□□□□ -1.21
SOX1O00570 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms