Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL176P-201ENST00000580352 264 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AP002505.1-201ENST00000592655 228 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AP000962.1-201ENST00000602654 729 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC005070.2-201ENST00000604391 260 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 OR7M1P-201ENST00000608946 533 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR6511A2-201ENST00000611011 67 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR6511A3-201ENST00000615389 67 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR6511A4-201ENST00000615860 67 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR6511A1-201ENST00000617664 67 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 HIST1H4L-201ENST00000618305 312 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR6085-201ENST00000618314 110 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC017037.4-201ENST00000624526 826 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC026108.1-201ENST00000635444 547 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 SMG7-216ENST00000638826 219 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 DDX18P4-201ENST00000511690 1966 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC100778.3-201ENST00000580060 1750 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL450345.1-202ENST00000605741 3881 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC090774.4-201ENST00000578888 1372 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AC011933.2-201ENST00000578539 2790 ntBASIC3.12□□□□□ -1.91
CHKB-CPT1BH3BT56 AL133243.2-201ENST00000610331 1621 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 EEF1A1P2-201ENST00000553854 1447 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL450326.2-201ENST00000421913 1962 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC018529.3-201ENST00000624212 2254 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC007618.1-201ENST00000366455 732 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP297-201ENST00000391029 113 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC133644.1-201ENST00000398171 937 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL121834.1-202ENST00000404494 277 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 SNORA77.2-201ENST00000408571 112 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC245096.1-201ENST00000413104 546 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RNGTTP1-201ENST00000420965 728 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL36AP10-201ENST00000421785 322 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 OR10T1P-201ENST00000424327 947 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 MYL6BP1-201ENST00000429485 615 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009518.3-201ENST00000438972 253 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC234771.2-201ENST00000445718 597 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL23AP60-201ENST00000450011 454 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 UGT1A11P-201ENST00000456635 849 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC109454.1-201ENST00000471205 498 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL505P-201ENST00000482644 293 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 RN7SL714P-201ENST00000487050 298 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 PFN2-213ENST00000494827 793 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 NMNAT1P4-201ENST00000505598 840 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC098976.1-201ENST00000513014 541 ntBASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 TCEA1-206ENST00000520534 635 ntTSL 2 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.11□□□□□ -1.91
CHKB-CPT1BH3BT56 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms