Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 SNRPGP1-201ENST00000553864 222 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 MIR132-201ENST00000591554 101 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC009237.12-201ENST00000604755 742 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC239803.2-201ENST00000610161 430 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 OR8G7P-201ENST00000616658 848 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 MIR6823-201ENST00000622118 61 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC020763.5-201ENST00000623298 430 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC007603.3-201ENST00000636915 979 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC003985.2-201ENST00000562268 1669 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 AC107021.2-201ENST00000567714 2095 ntBASIC4.92□□□□□ -1.62
SRRM4A7MD48 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SRRM4A7MD48 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.92□□□□□ -1.62
SRRM4A7MD48 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC114876.1-201ENST00000490962 1366 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL356317.1-201ENST00000396110 1436 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 SNORD65-201ENST00000391079 73 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 RNU2-22P-201ENST00000411266 212 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 VN1R20P-201ENST00000425215 966 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 DSTNP5-201ENST00000427921 523 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 RPS18P1-201ENST00000447840 458 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 RPL23AP60-201ENST00000450011 454 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 RPS7P10-201ENST00000464254 603 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 SNRPCP11-201ENST00000492453 205 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 HMGN1P16-201ENST00000508308 283 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 RNU6-760P-201ENST00000516078 97 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 RN7SKP34-201ENST00000516142 244 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 RNA5SP434-201ENST00000516647 121 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 WBP1LP12-201ENST00000604449 331 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 RPSAP75-201ENST00000605848 301 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 NQO2-209ENST00000606474 470 ntTSL 3 BASIC4.91□□□□□ -1.62
SRRM4A7MD48 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC015922.4-201ENST00000612568 690 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SRRM4A7MD48 AL158062.1-201ENST00000619632 745 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 AC069234.4-201ENST00000621276 412 ntBASIC4.91□□□□□ -1.62
SRRM4A7MD48 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms