Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 EIF1P6-201ENST00000600054 334 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AP001267.4-201ENST00000602598 545 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC103881.1-201ENST00000603476 538 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AP002360.3-201ENST00000607673 710 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC026951.2-201ENST00000613847 241 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC013476.2-201ENST00000614456 459 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC011815.3-201ENST00000624194 473 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 SNORA43.5-201ENST00000631270 138 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 AC087565.3-203ENST00000641018 837 ntBASIC6.4□□□□□ -1.38
SHISA3A0PJX4 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 SMAD5-AS1-201ENST00000297163 1816 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
SHISA3A0PJX4 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 WNK1-220ENST00000574564 1401 ntBASIC6.4□□□□□ -1.39
SHISA3A0PJX4 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 KCNMB2-202ENST00000420517 1563 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
SHISA3A0PJX4 MAPK10-344ENST00000641718 3746 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC104699.1-201ENST00000352271 414 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 HMGB1P39-201ENST00000366304 880 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 VN1R12P-201ENST00000403778 876 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MTCO3P31-201ENST00000405526 789 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 HMGB3P18-201ENST00000406327 590 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 GEMIN2P2-201ENST00000418195 715 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RBMY2FP-202ENST00000420346 1263 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CYCSP46-201ENST00000423569 204 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AL356387.1-201ENST00000426321 476 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MTND1P2-201ENST00000430604 821 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC234064.1-201ENST00000436312 247 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 OR3B1P-201ENST00000437536 893 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RPS10P3-201ENST00000439253 494 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 TRIM60P18-201ENST00000441518 828 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 SS18L2P1-201ENST00000445923 213 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RHEBP2-201ENST00000450289 600 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RPL36AP33-201ENST00000450395 310 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 DDX39BP2-208ENST00000453923 258 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MTCO3P11-201ENST00000455103 774 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC008026.1-201ENST00000460492 447 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 PGBD4P1-201ENST00000473644 407 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RN7SL685P-201ENST00000476271 298 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC084878.1-201ENST00000480555 648 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 OR4G11P-201ENST00000492842 939 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RPL12P7-201ENST00000493832 494 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 ARL2BPP4-201ENST00000506854 471 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC095057.1-201ENST00000507583 168 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC006499.4-201ENST00000510947 694 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 MTCYBP44-201ENST00000514835 823 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 SNX18P27-201ENST00000523611 779 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AP001207.1-201ENST00000524051 481 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.39□□□□□ -1.39
SHISA3A0PJX4 AC004825.1-201ENST00000555068 586 ntBASIC6.39□□□□□ -1.39
SHISA3A0PJX4 RPS3AP4-201ENST00000555161 764 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms