Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 CCDC58P1-201ENST00000578567 430 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 MIR4701-201ENST00000583094 63 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 VN1R81P-201ENST00000602085 372 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 NDUFB9P1-201ENST00000604683 510 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC093388.1-201ENST00000609166 430 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AC006249.1-201ENST00000621223 471 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 AL138693.1-201ENST00000622219 129 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 FO681491.1-202ENST00000623392 737 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
TCRBV7S3A2A0A539 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
TCRBV7S3A2A0A539 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.09□□□□□ -1.44
TCRBV7S3A2A0A539 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.09□□□□□ -1.44
TCRBV7S3A2A0A539 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.09□□□□□ -1.44
TCRBV7S3A2A0A539 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.09□□□□□ -1.44
TCRBV7S3A2A0A539 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AL512283.1-201ENST00000606756 1384 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 THAP12P9-201ENST00000503971 2360 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 PSMA6P1-201ENST00000400275 741 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AL132875.1-201ENST00000403623 949 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 RPL12P43-201ENST00000420608 499 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 NMD3P2-201ENST00000421815 761 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 MTND2P9-201ENST00000422293 931 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 HSFY1P1-201ENST00000423928 1178 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC073072.2-201ENST00000447425 348 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC097359.1-201ENST00000447946 463 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 RN7SL552P-201ENST00000462094 276 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 RPL38P3-201ENST00000484463 213 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC078899.1-201ENST00000521432 1185 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AL645933.2-201ENST00000606743 1207 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC007603.3-201ENST00000636915 979 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC010325.3-201ENST00000641084 394 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 AC068446.1-201ENST00000556425 1549 ntBASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TCRBV7S3A2A0A539 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 U3.10-201ENST00000364459 214 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 MIR188-201ENST00000385034 86 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 EEF1B2P8-201ENST00000414101 671 ntBASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.07□□□□□ -1.44
TCRBV7S3A2A0A539 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 284.1 ms