Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SCN10AQ9Y5Y9 AC079834.2-201ENST00000609776 1949 ntBASIC21.7■■□□□ 1.07
SCN10AQ9Y5Y9 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
SCN10AQ9Y5Y9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SCN10AQ9Y5Y9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.7■■□□□ 1.07
SCN10AQ9Y5Y9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.7■■□□□ 1.07
SCN10AQ9Y5Y9 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 AC091390.4-202ENST00000476426 537 ntBASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCN10AQ9Y5Y9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 FAM8A6P-201ENST00000407496 1135 ntBASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 AC008040.2-201ENST00000461049 708 ntBASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 YBX1P2-201ENST00000489612 999 ntBASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 AL138966.2-201ENST00000621997 464 ntBASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 SMG8-203ENST00000578922 2178 ntBASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.69■■□□□ 1.06
SCN10AQ9Y5Y9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 AC087388.1-201ENST00000571370 1112 ntBASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.68■■□□□ 1.06
SCN10AQ9Y5Y9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 AC010653.2-201ENST00000623505 997 ntBASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 AC130371.2-201ENST00000619443 611 ntBASIC21.67■■□□□ 1.06
SCN10AQ9Y5Y9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCN10AQ9Y5Y9 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms