Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 POM121L13P-201ENST00000422362 380 ntBASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 RN7SL471P-201ENST00000580476 299 ntBASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB3Q9Y5E6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
PCDHB3Q9Y5E6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 AC005829.2-201ENST00000571422 1056 ntBASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 AC069544.1-201ENST00000609399 999 ntBASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 BX323043.1-201ENST00000641006 1765 ntBASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB3Q9Y5E6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 AC116562.4-201ENST00000641316 2276 ntBASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB3Q9Y5E6 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 AL020996.1-203ENST00000536896 2307 ntBASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 MIR2861-201ENST00000636310 90 ntBASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 AC125437.2-201ENST00000625180 2167 ntBASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB3Q9Y5E6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms