Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 AC087499.1-201ENST00000418141 1075 ntBASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 MTDHP1-201ENST00000605323 784 ntBASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHB9Q9Y5E1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 AC124016.1-201ENST00000609552 612 ntBASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 AC110285.5-201ENST00000611501 352 ntBASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 AL691432.2-201ENST00000607222 2038 ntBASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHB9Q9Y5E1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 AC133681.1-201ENST00000465482 601 ntBASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHB9Q9Y5E1 PCDHAC2-203ENST00000615316 3011 ntBASIC20.02■□□□□ 0.79
PCDHB9Q9Y5E1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB9Q9Y5E1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHB9Q9Y5E1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDHB9Q9Y5E1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDHB9Q9Y5E1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB9Q9Y5E1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB9Q9Y5E1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms