Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 TUBB8P6-201ENST00000436895 1288 ntBASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00588Q9Y4M8 GABARAPL3-202ENST00000624044 1851 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 NIFKP9-201ENST00000419265 221 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 KRT18P16-201ENST00000510337 1294 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 BX088651.1-201ENST00000540551 451 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 AL355075.4-201ENST00000554988 638 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 AP003071.4-201ENST00000562276 1284 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 CR392000.1-201ENST00000624770 1228 ntBASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
LINC00588Q9Y4M8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 RNF165-205ENST00000588679 2904 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 KSR1P1-201ENST00000446298 240 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 TSPY15P-201ENST00000457163 923 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 C1QL1P1-201ENST00000568105 661 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 REXO1L12P-201ENST00000622156 912 ntBASIC13.49□□□□□ -0.25
LINC00588Q9Y4M8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms