Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RHBDD3Q9Y3P4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 MIR663A-201ENST00000385250 93 ntBASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 AC105036.2-201ENST00000569468 176 ntBASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 PTBP1P-201ENST00000554374 1601 ntBASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.24■□□□□ 0.35
RHBDD3Q9Y3P4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 CROCCP5-201ENST00000436658 830 ntBASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RHBDD3Q9Y3P4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 AP000974.1-201ENST00000623909 2387 ntBASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 AF201337.1-201ENST00000520239 748 ntBASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RHBDD3Q9Y3P4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 MKRN4P-201ENST00000444706 1521 ntBASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 LSM12P1-201ENST00000411836 588 ntBASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 C2orf69P4-201ENST00000565394 541 ntBASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RHBDD3Q9Y3P4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.21■□□□□ 0.34
RHBDD3Q9Y3P4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHBDD3Q9Y3P4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RHBDD3Q9Y3P4 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.21■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms