Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CDK11AQ9UQ88 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 SLC25A1P2-201ENST00000430693 912 ntBASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 MFAP1P1-201ENST00000442257 1255 ntBASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 CCR12P-201ENST00000446203 998 ntBASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 FAM207BP-201ENST00000447172 505 ntBASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 AC022616.7-201ENST00000525383 220 ntBASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CDK11AQ9UQ88 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 GUK1-204ENST00000366721 689 ntTSL 3 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
CDK11AQ9UQ88 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC30.52■■■□□ 2.48
CDK11AQ9UQ88 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC30.51■■■□□ 2.48
CDK11AQ9UQ88 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.48
CDK11AQ9UQ88 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.48
CDK11AQ9UQ88 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 AL138966.2-201ENST00000621997 464 ntBASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 AC010653.2-201ENST00000623505 997 ntBASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CDK11AQ9UQ88 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 AC117947.1-201ENST00000427448 529 ntBASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 TMEM179-206ENST00000616017 1645 ntBASIC30.5■■■□□ 2.47
CDK11AQ9UQ88 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CDK11AQ9UQ88 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CDK11AQ9UQ88 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms