Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SNORA78-201ENST00000459373 127 ntBASIC20.88■□□□□ 0.93
CDH9Q9ULB4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 AL353708.3-201ENST00000610272 989 ntBASIC20.88■□□□□ 0.93
CDH9Q9ULB4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 AC009237.14-201ENST00000609975 1594 ntBASIC20.88■□□□□ 0.93
CDH9Q9ULB4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
CDH9Q9ULB4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.88■□□□□ 0.93
CDH9Q9ULB4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 C1QL1P1-201ENST00000568105 661 ntBASIC20.87■□□□□ 0.93
CDH9Q9ULB4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDH9Q9ULB4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.86■□□□□ 0.93
CDH9Q9ULB4 AP002982.1-201ENST00000492365 877 ntBASIC20.86■□□□□ 0.93
CDH9Q9ULB4 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 AC073195.1-201ENST00000607241 877 ntBASIC20.86■□□□□ 0.93
CDH9Q9ULB4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDH9Q9ULB4 TMEM179-206ENST00000616017 1645 ntBASIC20.86■□□□□ 0.93
CDH9Q9ULB4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.85■□□□□ 0.93
CDH9Q9ULB4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH9Q9ULB4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH9Q9ULB4 TCF3P1-201ENST00000423021 1937 ntBASIC20.83■□□□□ 0.93
CDH9Q9ULB4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms