Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 AC093827.2-201ENST00000512654 315 ntBASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
GTF3C4Q9UKN8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GTF3C4Q9UKN8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 UBE2SP1-201ENST00000450587 669 ntBASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 AP006294.2-201ENST00000641667 209 ntBASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GTF3C4Q9UKN8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GTF3C4Q9UKN8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 AC124016.1-201ENST00000609552 612 ntBASIC21.19■□□□□ 0.98
GTF3C4Q9UKN8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms