Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.08■□□□□ 0.64
LRIT1Q9P2V4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 KRT18P16-201ENST00000510337 1294 ntBASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 AC010331.1-201ENST00000611423 582 ntBASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.07■□□□□ 0.64
LRIT1Q9P2V4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 RCN1P1-201ENST00000400413 996 ntBASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 MIR6786-201ENST00000616843 113 ntBASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 KRT8P9-201ENST00000558927 1449 ntBASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRIT1Q9P2V4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 AL445675.2-201ENST00000620291 557 ntBASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRIT1Q9P2V4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 AL390955.1-201ENST00000428694 934 ntBASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 AC145285.6-201ENST00000604632 637 ntBASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRIT1Q9P2V4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms