Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
BLOC1S4Q9NUP1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
BLOC1S4Q9NUP1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.95■■□□□ 1.11
BLOC1S4Q9NUP1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
BLOC1S4Q9NUP1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 CD99P1-205ENST00000527459 561 ntBASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
BLOC1S4Q9NUP1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 ESRRAP1-201ENST00000400596 1257 ntBASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.94■■□□□ 1.1
BLOC1S4Q9NUP1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 AC069544.1-201ENST00000609399 999 ntBASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BLOC1S4Q9NUP1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
BLOC1S4Q9NUP1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.91■■□□□ 1.1
BLOC1S4Q9NUP1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms