Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 SNORA78-201ENST00000459373 127 ntBASIC21.73■■□□□ 1.07
RNF39Q9H2S5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 SRPK2P-201ENST00000523408 1100 ntBASIC21.73■■□□□ 1.07
RNF39Q9H2S5 CD69-203ENST00000536709 1020 ntTSL 2 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 AL121829.2-201ENST00000620908 328 ntBASIC21.73■■□□□ 1.07
RNF39Q9H2S5 CHAC2-201ENST00000295304 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RNF39Q9H2S5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC100757.3-201ENST00000622361 1406 ntBASIC21.72■■□□□ 1.07
RNF39Q9H2S5 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 RPS2P55-201ENST00000397318 883 ntBASIC21.72■■□□□ 1.07
RNF39Q9H2S5 MS4A6A-201ENST00000412309 1284 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC107956.1-201ENST00000494359 873 ntBASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 RAB30-AS1-205ENST00000530270 1116 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 MIR4497-201ENST00000583208 89 ntBASIC21.72■■□□□ 1.07
RNF39Q9H2S5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RNF39Q9H2S5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 LUZP4P1-201ENST00000415420 344 ntBASIC21.71■■□□□ 1.07
RNF39Q9H2S5 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 AC104629.2-201ENST00000468627 598 ntBASIC21.71■■□□□ 1.07
RNF39Q9H2S5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 DPP3P2-201ENST00000416030 1696 ntBASIC21.71■■□□□ 1.07
RNF39Q9H2S5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RNF39Q9H2S5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AC016550.1-201ENST00000505348 785 ntBASIC21.7■■□□□ 1.06
RNF39Q9H2S5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 OR8K4P-201ENST00000534608 872 ntBASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AC233702.5-201ENST00000584107 538 ntBASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AL031963.3-201ENST00000606441 850 ntBASIC21.7■■□□□ 1.06
RNF39Q9H2S5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RNF39Q9H2S5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.69■■□□□ 1.06
RNF39Q9H2S5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms