Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 AC009237.14-201ENST00000609975 1594 ntBASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
AMBRA1Q9C0C7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 DUX4L16-201ENST00000555130 1264 ntBASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 AC016405.3-201ENST00000607710 860 ntBASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
AMBRA1Q9C0C7 AC005082.1-201ENST00000413042 2259 ntBASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 KRT8P17-201ENST00000453110 1448 ntBASIC18.4■□□□□ 0.54
AMBRA1Q9C0C7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.39■□□□□ 0.54
AMBRA1Q9C0C7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.39■□□□□ 0.54
AMBRA1Q9C0C7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
AMBRA1Q9C0C7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.39■□□□□ 0.53
AMBRA1Q9C0C7 AC007613.1-201ENST00000572811 2597 ntBASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 AL032819.2-201ENST00000624543 2162 ntBASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 AL162412.1-201ENST00000567129 965 ntBASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 AC231657.2-201ENST00000624556 255 ntBASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
AMBRA1Q9C0C7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms