Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AC068338.2-201ENST00000563278 1430 ntBASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AL355472.2-201ENST00000422958 438 ntBASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AC087623.3-201ENST00000607047 1098 ntBASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AC011767.1-201ENST00000617410 1153 ntBASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 AP001271.2-201ENST00000624018 1556 ntBASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HDHD3Q9BSH5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 KRT18P68-201ENST00000392293 1000 ntBASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 KRT18P11-201ENST00000435214 1283 ntBASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 AC100791.3-201ENST00000617619 330 ntBASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.61■□□□□ 0.25
HDHD3Q9BSH5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 PLD4-205ENST00000553861 667 ntTSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 DUX4L16-201ENST00000555130 1264 ntBASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HDHD3Q9BSH5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HDHD3Q9BSH5 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms