Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.94■□□□□ 0.94
SUSD3Q96L08 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUSD3Q96L08 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SUSD3Q96L08 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 MMP23A-201ENST00000234610 1017 ntBASIC20.93■□□□□ 0.94
SUSD3Q96L08 UNC93B2-201ENST00000285383 730 ntBASIC20.93■□□□□ 0.94
SUSD3Q96L08 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.93■□□□□ 0.94
SUSD3Q96L08 AC012306.2-201ENST00000609350 630 ntBASIC20.93■□□□□ 0.94
SUSD3Q96L08 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.93■□□□□ 0.94
SUSD3Q96L08 AC133561.5-201ENST00000635547 218 ntBASIC20.93■□□□□ 0.94
SUSD3Q96L08 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.93■□□□□ 0.94
SUSD3Q96L08 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUSD3Q96L08 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.93■□□□□ 0.94
SUSD3Q96L08 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.92■□□□□ 0.94
SUSD3Q96L08 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SUSD3Q96L08 AC097493.4-201ENST00000641197 219 ntBASIC20.92■□□□□ 0.94
SUSD3Q96L08 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUSD3Q96L08 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SUSD3Q96L08 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 AC004980.1-204ENST00000429707 299 ntBASIC20.91■□□□□ 0.94
SUSD3Q96L08 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUSD3Q96L08 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
SUSD3Q96L08 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.91■□□□□ 0.94
SUSD3Q96L08 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 AL691432.2-201ENST00000607222 2038 ntBASIC20.9■□□□□ 0.94
SUSD3Q96L08 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 MESTP1-201ENST00000404287 994 ntBASIC20.9■□□□□ 0.94
SUSD3Q96L08 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 HLA-A-209ENST00000638375 975 ntBASIC20.9■□□□□ 0.94
SUSD3Q96L08 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUSD3Q96L08 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.9■□□□□ 0.94
SUSD3Q96L08 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SUSD3Q96L08 FSCN1P1-201ENST00000568912 1481 ntBASIC20.89■□□□□ 0.94
SUSD3Q96L08 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SUSD3Q96L08 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SUSD3Q96L08 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUSD3Q96L08 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUSD3Q96L08 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SUSD3Q96L08 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.89■□□□□ 0.93
SUSD3Q96L08 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.89■□□□□ 0.93
SUSD3Q96L08 AC131212.4-201ENST00000623606 975 ntBASIC20.89■□□□□ 0.93
SUSD3Q96L08 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUSD3Q96L08 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SUSD3Q96L08 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SUSD3Q96L08 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUSD3Q96L08 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SUSD3Q96L08 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SUSD3Q96L08 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.88■□□□□ 0.93
SUSD3Q96L08 KRT8P8-201ENST00000434750 1448 ntBASIC20.88■□□□□ 0.93
SUSD3Q96L08 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.88■□□□□ 0.93
SUSD3Q96L08 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SUSD3Q96L08 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.88■□□□□ 0.93
SUSD3Q96L08 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SUSD3Q96L08 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms