Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 AC133681.1-201ENST00000465482 601 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 AC110285.5-201ENST00000611501 352 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 NBPF21P-201ENST00000425093 1451 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 TFP1-202ENST00000475455 1573 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
APH1AQ96BI3 AL691432.2-201ENST00000607222 2038 ntBASIC17.47■□□□□ 0.39
APH1AQ96BI3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
APH1AQ96BI3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
APH1AQ96BI3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.46■□□□□ 0.39
APH1AQ96BI3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
APH1AQ96BI3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.46■□□□□ 0.38
APH1AQ96BI3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
APH1AQ96BI3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
APH1AQ96BI3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 AC004264.1-201ENST00000608354 794 ntBASIC17.45■□□□□ 0.38
APH1AQ96BI3 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.45■□□□□ 0.38
APH1AQ96BI3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
APH1AQ96BI3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
APH1AQ96BI3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
APH1AQ96BI3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
APH1AQ96BI3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms