Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 AC099778.1-201ENST00000568593 1911 ntBASIC17.69■□□□□ 0.42
CPNE4Q96A23 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 AC133681.1-201ENST00000465482 601 ntBASIC17.69■□□□□ 0.42
CPNE4Q96A23 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 AL359736.2-201ENST00000621992 437 ntBASIC17.69■□□□□ 0.42
CPNE4Q96A23 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 TFP1-202ENST00000475455 1573 ntBASIC17.69■□□□□ 0.42
CPNE4Q96A23 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.69■□□□□ 0.42
CPNE4Q96A23 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.69■□□□□ 0.42
CPNE4Q96A23 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPNE4Q96A23 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 KRASP1-201ENST00000407852 552 ntBASIC17.68■□□□□ 0.42
CPNE4Q96A23 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 AL158047.1-201ENST00000445918 881 ntBASIC17.68■□□□□ 0.42
CPNE4Q96A23 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 AC124016.1-201ENST00000609552 612 ntBASIC17.68■□□□□ 0.42
CPNE4Q96A23 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.68■□□□□ 0.42
CPNE4Q96A23 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPNE4Q96A23 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 AC110285.5-201ENST00000611501 352 ntBASIC17.67■□□□□ 0.42
CPNE4Q96A23 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 NBPF21P-201ENST00000425093 1451 ntBASIC17.67■□□□□ 0.42
CPNE4Q96A23 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CPNE4Q96A23 AP006587.1-201ENST00000534129 1502 ntBASIC17.67■□□□□ 0.42
CPNE4Q96A23 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CPNE4Q96A23 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.66■□□□□ 0.42
CPNE4Q96A23 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPNE4Q96A23 AL691432.2-201ENST00000607222 2038 ntBASIC17.66■□□□□ 0.42
CPNE4Q96A23 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CPNE4Q96A23 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CPNE4Q96A23 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CPNE4Q96A23 UBE2SP1-201ENST00000450587 669 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms